Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:72490028-72600028

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc35e1 8 72480641 to 72492614 11973 - protein coding gene solute carrier family 35, member E1
Cpgi20588 8 72491573 to 72493279 1706 CpG island CpG island 20588
Tssr81797 8 72491672 to 72491685 13 - TSS region transcription start site region 81797
Tssr81798 8 72491686 to 72491706 20 - TSS region transcription start site region 81798
Tssr77982 8 72491819 to 72491839 20 + TSS region transcription start site region 77982
Tssr77983 8 72491847 to 72491862 15 + TSS region transcription start site region 77983
Tssr77984 8 72492223 to 72492265 42 + TSS region transcription start site region 77984
Tssr81799 8 72492592 to 72492662 70 - TSS region transcription start site region 81799
Tssr77985 8 72492915 to 72492951 36 + TSS region transcription start site region 77985
Gm17435 8 72492934 to 72505499 12565 + antisense lncRNA gene predicted gene, 17435
Tssr77986 8 72492982 to 72492993 11 + TSS region transcription start site region 77986
Tssr77987 8 72493015 to 72493024 9 + TSS region transcription start site region 77987
Med26 8 72494561 to 72548270 53709 - protein coding gene mediator complex subunit 26
Tssr77988 8 72515267 to 72515287 20 + TSS region transcription start site region 77988
Gm18646 8 72515358 to 72516420 1062 + pseudogene predicted gene, 18646
Tssr77989 8 72530969 to 72531003 34 + TSS region transcription start site region 77989
Gm35857 8 72531031 to 72531208 177 + pseudogene predicted gene, 35857
Gm28019 8 72541480 to 72541580 100 - miRNA gene predicted gene, 28019
Carg3 8 72545028 to 72545028 0 QTL Candida albicans resistance gene 3
Cpgi20589 8 72547452 to 72549261 1809 CpG island CpG island 20589
Tssr81800 8 72548224 to 72548287 63 - TSS region transcription start site region 81800
Tssr81801 8 72548345 to 72548354 9 - TSS region transcription start site region 81801
Tssr77990 8 72548394 to 72548424 30 + TSS region transcription start site region 77990
Gm46042 8 72548406 to 72559318 10912 + lncRNA gene predicted gene, 46042
1700085D22Rik 8 72548415 to 72551682 3267 unclassified gene RIKEN cDNA 1700085D22 gene
Tssr77991 8 72548459 to 72548470 11 + TSS region transcription start site region 77991
Tssr77992 8 72548499 to 72548583 84 + TSS region transcription start site region 77992
Smim7 8 72565198 to 72571048 5850 - protein coding gene small integral membrane protein 7
Cpgi20590 8 72570634 to 72571485 851 CpG island CpG island 20590
Tssr81802 8 72571033 to 72571067 34 - TSS region transcription start site region 81802
Tssr77993 8 72571179 to 72571226 47 + TSS region transcription start site region 77993
Cpgi20591 8 72571795 to 72572629 834 CpG island CpG island 20591
Tssr77994 8 72572013 to 72572024 11 + TSS region transcription start site region 77994
Tssr77995 8 72572027 to 72572059 32 + TSS region transcription start site region 77995
Tmem38a 8 72572055 to 72587282 15227 + protein coding gene transmembrane protein 38A
Tssr77996 8 72572069 to 72572114 45 + TSS region transcription start site region 77996
Tssr77997 8 72573643 to 72573650 7 + TSS region transcription start site region 77997
Tssr77998 8 72573681 to 72573694 13 + TSS region transcription start site region 77998
Tssr77999 8 72584085 to 72584116 31 + TSS region transcription start site region 77999
Tssr78000 8 72584707 to 72584718 11 + TSS region transcription start site region 78000
Tssr78001 8 72586157 to 72586194 37 + TSS region transcription start site region 78001