Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71827428-72267515

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40504 8 71815988 to 71828713 12725 + lncRNA gene predicted gene, 40504
Gm5373 8 71824641 to 71857281 32640 - protein coding gene predicted gene 5373
D8Mit72b 8 71856596 to 71856755 159 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 72b
D8Mit27b 8 71856637 to 71856827 190 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 27b
Vmn2r-ps91 8 71877780 to 71878563 783 + pseudogene vomeronasal 2, receptor, pseudogene 91
Cpgi20575 8 71881596 to 71882333 737 CpG island CpG island 20575
Tssr77924 8 71881725 to 71881780 55 + TSS region transcription start site region 77924
Tssr77925 8 71881961 to 71882006 45 + TSS region transcription start site region 77925
Tssr77926 8 71882035 to 71882046 11 + TSS region transcription start site region 77926
Tssr77927 8 71882060 to 71882120 60 + TSS region transcription start site region 77927
Zfp709 8 71882068 to 71892565 10497 + protein coding gene zinc finger protein 709
Cpgi20576 8 71908455 to 71909129 674 CpG island CpG island 20576
Tssr77928 8 71908595 to 71908654 59 + TSS region transcription start site region 77928
Zfp882 8 71908608 to 71916354 7746 + protein coding gene zinc finger protein 882
Tssr77929 8 71908677 to 71908687 10 + TSS region transcription start site region 77929
Ccnb2-ps 8 71917069 to 71917989 920 - pseudogene cyclin B2, pseudogene
Cpgi20577 8 71922549 to 71923361 812 CpG island CpG island 20577
Tssr77930 8 71922810 to 71922835 25 + TSS region transcription start site region 77930
Zfp617 8 71922825 to 71934630 11805 + protein coding gene zinc finger protein 617
Tssr77931 8 71922885 to 71922901 16 + TSS region transcription start site region 77931
Cpgi20578 8 71950795 to 71951374 579 CpG island CpG island 20578
Tssr77932 8 71951054 to 71951130 76 + TSS region transcription start site region 77932
Zfp961 8 71951066 to 71970333 19267 + protein coding gene zinc finger protein 961
Tssr77933 8 71957721 to 71957724 3 + TSS region transcription start site region 77933
Gm45694 8 71983903 to 71987153 3250 + unclassified gene predicted gene 45694
Cpgi20579 8 71988446 to 71988827 381 CpG island CpG island 20579
Cyp4f18 8 71988482 to 72009626 21144 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 18
Tssr81762 8 72002531 to 72002547 16 - TSS region transcription start site region 81762
Tssr81763 8 72002549 to 72002561 12 - TSS region transcription start site region 81763
Tssr81764 8 72002581 to 72002588 7 - TSS region transcription start site region 81764
Tssr81765 8 72002623 to 72002633 10 - TSS region transcription start site region 81765
Tssr77934 8 72008530 to 72008563 33 + TSS region transcription start site region 77934
Tssr81766 8 72009619 to 72009634 15 - TSS region transcription start site region 81766
Gm45734 8 72035245 to 72035655 410 + pseudogene predicted gene 45734
Gm18924 8 72036069 to 72036588 519 - pseudogene predicted gene, 18924
Gm25052 8 72037642 to 72037799 157 + snRNA gene predicted gene, 25052
Gm45544 8 72047428 to 72047515 87 + pseudogene predicted gene 45544
Olfr372 8 72057660 to 72058675 1015 + protein coding gene olfactory receptor 372
Gm45735 8 72078774 to 72079092 318 - pseudogene predicted gene 45735
Gm45543 8 72089668 to 72089755 87 + pseudogene predicted gene 45543
Olfr373 8 72099762 to 72100706 944 + protein coding gene olfactory receptor 373
Olfr374 8 72107040 to 72110509 3469 + protein coding gene olfactory receptor 374
Gm24747 8 72111234 to 72111320 86 + rRNA gene predicted gene, 24747
Gm39196 8 72118451 to 72125924 7473 - lncRNA gene predicted gene, 39196
Cpgi20580 8 72134884 to 72136361 1477 CpG island CpG island 20580
Tssr77935 8 72135247 to 72135264 17 + TSS region transcription start site region 77935
Tssr77936 8 72135279 to 72135294 15 + TSS region transcription start site region 77936
Tpm4 8 72135292 to 72153129 17837 + protein coding gene tropomyosin 4
Tssr77937 8 72135302 to 72135314 12 + TSS region transcription start site region 77937
Tssr81767 8 72135731 to 72135766 35 - TSS region transcription start site region 81767
Tssr77938 8 72135763 to 72135828 65 + TSS region transcription start site region 77938
Tssr77939 8 72135842 to 72135866 24 + TSS region transcription start site region 77939
Tssr81768 8 72136729 to 72136751 22 - TSS region transcription start site region 81768
Tssr81769 8 72136774 to 72136789 15 - TSS region transcription start site region 81769
Tssr81770 8 72136798 to 72136815 17 - TSS region transcription start site region 81770
Gm26586 8 72137389 to 72140820 3431 - antisense lncRNA gene predicted gene, 26586
Tssr77940 8 72138629 to 72138665 36 + TSS region transcription start site region 77940
Tssr77941 8 72144536 to 72144545 9 + TSS region transcription start site region 77941
Tssr77942 8 72144559 to 72144585 26 + TSS region transcription start site region 77942
Tssr77943 8 72144590 to 72144636 46 + TSS region transcription start site region 77943
Tssr77944 8 72144644 to 72144661 17 + TSS region transcription start site region 77944
Tssr77945 8 72144663 to 72144683 20 + TSS region transcription start site region 77945
Gm16091 8 72147601 to 72160855 13254 - unclassified non-coding RNA gene predicted gene 16091
Tssr77946 8 72152562 to 72152584 22 + TSS region transcription start site region 77946
Tssr77947 8 72152596 to 72152610 14 + TSS region transcription start site region 77947
Tssr77948 8 72152624 to 72152636 12 + TSS region transcription start site region 77948
Tssr81771 8 72160545 to 72160552 7 - TSS region transcription start site region 81771
Cpgi20581 8 72160560 to 72161739 1179 CpG island CpG island 20581
Tssr81772 8 72160805 to 72160869 64 - TSS region transcription start site region 81772
Tssr77949 8 72161101 to 72161147 46 + TSS region transcription start site region 77949
Rab8a 8 72161200 to 72181366 20166 + protein coding gene RAB8A, member RAS oncogene family
Tssr77950 8 72161334 to 72161369 35 + TSS region transcription start site region 77950
Tssr81773 8 72162949 to 72162960 11 - TSS region transcription start site region 81773
Tssr77951 8 72169286 to 72169291 5 + TSS region transcription start site region 77951
Tssr77952 8 72183986 to 72183990 4 + TSS region transcription start site region 77952
Tssr77953 8 72189613 to 72189664 51 + TSS region transcription start site region 77953
Hsh2d 8 72189668 to 72200958 11290 + protein coding gene hematopoietic SH2 domain containing
Cib3 8 72204335 to 72212837 8502 - protein coding gene calcium and integrin binding family member 3
Gm11034 8 72213494 to 72213636 142 - protein coding gene predicted gene 11034
Tssr77954 8 72219020 to 72219036 16 + TSS region transcription start site region 77954
Cpgi20582 8 72219558 to 72220173 615 CpG island CpG island 20582
Tssr77955 8 72219720 to 72219723 3 + TSS region transcription start site region 77955
Tssr77956 8 72219726 to 72219785 59 + TSS region transcription start site region 77956
Fam32a 8 72219730 to 72223775 4045 + protein coding gene family with sequence similarity 32, member A
Tssr77957 8 72219797 to 72219808 11 + TSS region transcription start site region 77957
Cpgi20583 8 72239514 to 72240704 1190 CpG island CpG island 20583
Tssr77958 8 72240034 to 72240045 11 + TSS region transcription start site region 77958
Tssr77959 8 72240052 to 72240181 129 + TSS region transcription start site region 77959
Ap1m1 8 72240052 to 72257385 17333 + protein coding gene adaptor-related protein complex AP-1, mu subunit 1
Tssr77960 8 72240315 to 72240346 31 + TSS region transcription start site region 77960
Tssr77961 8 72240348 to 72240353 5 + TSS region transcription start site region 77961
Tssr77962 8 72247414 to 72247432 18 + TSS region transcription start site region 77962
Tssr77963 8 72255761 to 72255767 6 + TSS region transcription start site region 77963