Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71727780-72028563

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi20574 8 71741652 to 71742021 369 CpG island CpG island 20574
Gm35572 8 71751873 to 71756195 4322 - lincRNA gene predicted gene, 35572
Tssr77921 8 71757454 to 71757468 14 + TSS region transcription start site region 77921
Tssr81761 8 71757585 to 71757597 12 - TSS region transcription start site region 81761
Gm29705 8 71760118 to 71760591 473 + pseudogene predicted gene, 29705
Tssr77922 8 71780592 to 71780601 9 + TSS region transcription start site region 77922
Tssr77923 8 71789245 to 71789260 15 + TSS region transcription start site region 77923
Gm40504 8 71815988 to 71828713 12725 + lncRNA gene predicted gene, 40504
Gm5373 8 71824641 to 71857281 32640 - protein coding gene predicted gene 5373
D8Mit72b 8 71856596 to 71856755 159 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 72b
D8Mit27b 8 71856637 to 71856827 190 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 27b
Vmn2r-ps91 8 71877780 to 71878563 783 + pseudogene vomeronasal 2, receptor, pseudogene 91
Cpgi20575 8 71881596 to 71882333 737 CpG island CpG island 20575
Tssr77924 8 71881725 to 71881780 55 + TSS region transcription start site region 77924
Tssr77925 8 71881961 to 71882006 45 + TSS region transcription start site region 77925
Tssr77926 8 71882035 to 71882046 11 + TSS region transcription start site region 77926
Tssr77927 8 71882060 to 71882120 60 + TSS region transcription start site region 77927
Zfp709 8 71882068 to 71892565 10497 + protein coding gene zinc finger protein 709
Cpgi20576 8 71908455 to 71909129 674 CpG island CpG island 20576
Tssr77928 8 71908595 to 71908654 59 + TSS region transcription start site region 77928
Zfp882 8 71908608 to 71916354 7746 + protein coding gene zinc finger protein 882
Tssr77929 8 71908677 to 71908687 10 + TSS region transcription start site region 77929
Ccnb2-ps 8 71917069 to 71917989 920 - pseudogene cyclin B2, pseudogene
Cpgi20577 8 71922549 to 71923361 812 CpG island CpG island 20577
Tssr77930 8 71922810 to 71922835 25 + TSS region transcription start site region 77930
Zfp617 8 71922825 to 71934630 11805 + protein coding gene zinc finger protein 617
Tssr77931 8 71922885 to 71922901 16 + TSS region transcription start site region 77931
Cpgi20578 8 71950795 to 71951374 579 CpG island CpG island 20578
Tssr77932 8 71951054 to 71951130 76 + TSS region transcription start site region 77932
Zfp961 8 71951066 to 71970333 19267 + protein coding gene zinc finger protein 961
Tssr77933 8 71957721 to 71957724 3 + TSS region transcription start site region 77933
Gm45694 8 71983903 to 71987153 3250 + unclassified gene predicted gene 45694
Cpgi20579 8 71988446 to 71988827 381 CpG island CpG island 20579
Cyp4f18 8 71988482 to 72009626 21144 - protein coding gene cytochrome P450, family 4, subfamily f, polypeptide 18
Tssr81762 8 72002531 to 72002547 16 - TSS region transcription start site region 81762
Tssr81763 8 72002549 to 72002561 12 - TSS region transcription start site region 81763
Tssr81764 8 72002581 to 72002588 7 - TSS region transcription start site region 81764
Tssr81765 8 72002623 to 72002633 10 - TSS region transcription start site region 81765
Tssr77934 8 72008530 to 72008563 33 + TSS region transcription start site region 77934
Tssr81766 8 72009619 to 72009634 15 - TSS region transcription start site region 81766