Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71571047-71691106

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc27a1 8 71568882 to 71587302 18420 + protein coding gene solute carrier family 27 (fatty acid transporter), member 1
Cpgi20549 8 71570261 to 71571081 820 CpG island CpG island 20549
Tssr77877 8 71573994 to 71573999 5 + TSS region transcription start site region 77877
Tssr2604 8 71575909 to 71575913 4 + TSS region transcription start site region 2604
Tssr81739 8 71579044 to 71579049 5 - TSS region transcription start site region 81739
Tssr77878 8 71579232 to 71579237 5 + TSS region transcription start site region 77878
Tssr77879 8 71579263 to 71579300 37 + TSS region transcription start site region 77879
Tssr77880 8 71579306 to 71579320 14 + TSS region transcription start site region 77880
Tssr77881 8 71579329 to 71579347 18 + TSS region transcription start site region 77881
Tssr77882 8 71579413 to 71579448 35 + TSS region transcription start site region 77882
Tssr77883 8 71580429 to 71580446 17 + TSS region transcription start site region 77883
Tssr77884 8 71580463 to 71580481 18 + TSS region transcription start site region 77884
Tssr77885 8 71580483 to 71580506 23 + TSS region transcription start site region 77885
Tssr77886 8 71580516 to 71580526 10 + TSS region transcription start site region 77886
Tssr77887 8 71580528 to 71580565 37 + TSS region transcription start site region 77887
Tssr77888 8 71585930 to 71585957 27 + TSS region transcription start site region 77888
Tssr77889 8 71586115 to 71586128 13 + TSS region transcription start site region 77889
Tssr77890 8 71586479 to 71586526 47 + TSS region transcription start site region 77890
Cpgi20550 8 71591511 to 71593156 1645 CpG island CpG island 20550
Tssr77891 8 71591866 to 71591884 18 + TSS region transcription start site region 77891
Tssr81740 8 71592001 to 71592022 21 - TSS region transcription start site region 81740
Tssr81741 8 71592036 to 71592072 36 - TSS region transcription start site region 81741
Tssr77892 8 71592124 to 71592131 7 + TSS region transcription start site region 77892
Tssr77893 8 71592158 to 71592221 63 + TSS region transcription start site region 77893
Pgls 8 71592184 to 71596267 4083 + protein coding gene 6-phosphogluconolactonase
Tssr77894 8 71592229 to 71592240 11 + TSS region transcription start site region 77894
Tssr81742 8 71592441 to 71592455 14 - TSS region transcription start site region 81742
Tssr81743 8 71592470 to 71592504 34 - TSS region transcription start site region 81743
Tssr77895 8 71592545 to 71592594 49 + TSS region transcription start site region 77895
Cpgi20551 8 71595835 to 71596351 516 CpG island CpG island 20551
Fam129c 8 71597648 to 71607936 10288 + protein coding gene family with sequence similarity 129, member C
Tssr77896 8 71597672 to 71597675 3 + TSS region transcription start site region 77896
Tssr77897 8 71597698 to 71597718 20 + TSS region transcription start site region 77897
Cpgi20552 8 71601794 to 71603282 1488 CpG island CpG island 20552
Tssr77898 8 71602170 to 71602208 38 + TSS region transcription start site region 77898
Cpgi20553 8 71610883 to 71612083 1200 CpG island CpG island 20553
Colgalt1 8 71610998 to 71624911 13913 + protein coding gene collagen beta(1-O)galactosyltransferase 1
Tssr77899 8 71611102 to 71611157 55 + TSS region transcription start site region 77899
Tssr77900 8 71611160 to 71611200 40 + TSS region transcription start site region 77900
Tssr77901 8 71611203 to 71611212 9 + TSS region transcription start site region 77901
Tssr77902 8 71611230 to 71611249 19 + TSS region transcription start site region 77902
Tssr77903 8 71611250 to 71611260 10 + TSS region transcription start site region 77903
Tssr77904 8 71612144 to 71612163 19 + TSS region transcription start site region 77904
Tssr77905 8 71624028 to 71624058 30 + TSS region transcription start site region 77905
Unc13a 8 71626712 to 71671775 45063 - protein coding gene unc-13 homolog A
Cpgi20554 8 71628958 to 71630522 1564 CpG island CpG island 20554
Tssr77906 8 71629459 to 71629509 50 + TSS region transcription start site region 77906
Gm39195 8 71629524 to 71630910 1386 + lncRNA gene predicted gene, 39195
Mir6769b 8 71631047 to 71631106 59 - miRNA gene microRNA 6769b
Cpgi20555 8 71633102 to 71633506 404 CpG island CpG island 20555
Cpgi20556 8 71634423 to 71634715 292 CpG island CpG island 20556
Cpgi20557 8 71654748 to 71655176 428 CpG island CpG island 20557
Cpgi20558 8 71660397 to 71661093 696 CpG island CpG island 20558
Tssr81744 8 71665464 to 71665476 12 - TSS region transcription start site region 81744
Tssr81745 8 71665554 to 71665581 27 - TSS region transcription start site region 81745
Cpgi20559 8 71668235 to 71668545 310 CpG island CpG island 20559
Tssr77907 8 71668403 to 71668411 8 + TSS region transcription start site region 77907
Cpgi20560 8 71670581 to 71672041 1460 CpG island CpG island 20560
Tssr81746 8 71671723 to 71671772 49 - TSS region transcription start site region 81746
Tssr77908 8 71671815 to 71671853 38 + TSS region transcription start site region 77908
Cpgi20561 8 71676228 to 71676757 529 CpG island CpG island 20561
Tssr77909 8 71676233 to 71676254 21 + TSS region transcription start site region 77909
Tssr2605 8 71676276 to 71676315 39 + TSS region transcription start site region 2605
Jak3 8 71676383 to 71690577 14194 + protein coding gene Janus kinase 3
Tssr77910 8 71676472 to 71676492 20 + TSS region transcription start site region 77910
Tssr77911 8 71676501 to 71676580 79 + TSS region transcription start site region 77911
Tssr77912 8 71678314 to 71678321 7 + TSS region transcription start site region 77912
Cpgi20562 8 71679160 to 71680102 942 CpG island CpG island 20562
Cpgi20563 8 71680427 to 71680847 420 CpG island CpG island 20563
Cpgi20564 8 71684393 to 71684583 190 CpG island CpG island 20564
Cpgi20565 8 71685216 to 71687289 2073 CpG island CpG island 20565
Tssr77913 8 71686734 to 71686774 40 + TSS region transcription start site region 77913
Tssr77914 8 71686788 to 71686808 20 + TSS region transcription start site region 77914
Tssr77915 8 71687223 to 71687241 18 + TSS region transcription start site region 77915
Cpgi20566 8 71687980 to 71688227 247 CpG island CpG island 20566
Cpgi20567 8 71689070 to 71689541 471 CpG island CpG island 20567
Tssr77916 8 71689244 to 71689258 14 + TSS region transcription start site region 77916
Insl3 8 71689252 to 71690577 1325 + protein coding gene insulin-like 3
Cpgi20568 8 71689887 to 71690454 567 CpG island CpG island 20568
Tssr77917 8 71690218 to 71690229 11 + TSS region transcription start site region 77917
Tssr77918 8 71690382 to 71690401 19 + TSS region transcription start site region 77918
Tssr77919 8 71690483 to 71690537 54 + TSS region transcription start site region 77919
Tssr81747 8 71690572 to 71690574 2 - TSS region transcription start site region 81747
B3gnt3 8 71690756 to 71701789 11033 - protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3