Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71488574-71559285

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gtpbp3 8 71487863 to 71493400 5537 + protein coding gene GTP binding protein 3
Cpgi20538 8 71488377 to 71489560 1183 CpG island CpG island 20538
Tssr77862 8 71488715 to 71488743 28 + TSS region transcription start site region 77862
Tssr77863 8 71488764 to 71488771 7 + TSS region transcription start site region 77863
Plvap 8 71497765 to 71511752 13987 - protein coding gene plasmalemma vesicle associated protein
Tssr81717 8 71498158 to 71498170 12 - TSS region transcription start site region 81717
Tssr81718 8 71498239 to 71498259 20 - TSS region transcription start site region 81718
Gm46041 8 71502836 to 71505696 2860 - protein coding gene predicted gene, 46041
Tssr81719 8 71504428 to 71504436 8 - TSS region transcription start site region 81719
Cpgi20539 8 71507294 to 71508533 1239 CpG island CpG island 20539
Tssr81720 8 71507628 to 71507640 12 - TSS region transcription start site region 81720
Tssr81721 8 71507653 to 71507741 88 - TSS region transcription start site region 81721
Tssr81722 8 71507742 to 71507766 24 - TSS region transcription start site region 81722
Cpgi20540 8 71511305 to 71511876 571 CpG island CpG island 20540
Tssr81723 8 71511735 to 71511761 26 - TSS region transcription start site region 81723
Tssr81724 8 71511762 to 71511778 16 - TSS region transcription start site region 81724
Ccdc194 8 71520120 to 71525711 5591 - protein coding gene coiled-coil domain containing 194
Cpgi20541 8 71521695 to 71522076 381 CpG island CpG island 20541
Tssr77864 8 71523520 to 71523527 7 + TSS region transcription start site region 77864
Gm7850 8 71523574 to 71524285 711 + pseudogene predicted gene 7850
Cpgi20542 8 71525317 to 71525866 549 CpG island CpG island 20542
Tssr81725 8 71525701 to 71525713 12 - TSS region transcription start site region 81725
Tssr81726 8 71525719 to 71525730 11 - TSS region transcription start site region 81726
Bst2 8 71534259 to 71537437 3178 - protein coding gene bone marrow stromal cell antigen 2
Tssr77865 8 71534263 to 71534266 3 + TSS region transcription start site region 77865
Tssr81727 8 71534299 to 71534316 17 - TSS region transcription start site region 81727
Tssr81728 8 71535471 to 71535489 18 - TSS region transcription start site region 81728
Cpgi20543 8 71537053 to 71537506 453 CpG island CpG island 20543
Tssr81729 8 71537402 to 71537468 66 - TSS region transcription start site region 81729
Cpgi20544 8 71542625 to 71543584 959 CpG island CpG island 20544
Mvb12a 8 71542879 to 71548026 5147 + protein coding gene multivesicular body subunit 12A
Tssr77866 8 71542911 to 71542973 62 + TSS region transcription start site region 77866
Tssr77867 8 71543157 to 71543173 16 + TSS region transcription start site region 77867
Tssr77868 8 71543176 to 71543214 38 + TSS region transcription start site region 77868
Tmem221 8 71554238 to 71558871 4633 - protein coding gene transmembrane protein 221
Cpgi20545 8 71558089 to 71559466 1377 CpG island CpG island 20545
Tssr81730 8 71558906 to 71558919 13 - TSS region transcription start site region 81730
Tssr81731 8 71558970 to 71558983 13 - TSS region transcription start site region 81731
Tssr81732 8 71558990 to 71559011 21 - TSS region transcription start site region 81732
Tssr77869 8 71559177 to 71559191 14 + TSS region transcription start site region 77869