Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71252714-71380713

43 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
W10q14	8	32016544 to 71287993	39271449		QTL	weight 10 weeks QTL 14
Orq3	8	32016544 to 71287993	39271449		QTL	ovulation rate QTL 3
Egq12	8	32016544 to 71287993	39271449		QTL	early growth QTL 12
W6q9	8	32016544 to 71287993	39271449		QTL	weight 6 weeks QTL 9
Haus8	8	71251124 to 71272590	21466	-	protein coding gene	4HAUS augmin-like complex, subunit 8
Cpgi20520	8	71272087 to 71273376	1289		CpG island	CpG island 20520
Tssr81693	8	71272313 to 71272321	8	-	TSS region	transcription start site region 81693
Tssr81694	8	71272338 to 71272351	13	-	TSS region	transcription start site region 81694
Tssr81695	8	71272367 to 71272382	15	-	TSS region	transcription start site region 81695
Tssr81696	8	71272419 to 71272435	16	-	TSS region	transcription start site region 81696
Tssr81697	8	71272448 to 71272478	30	-	TSS region	transcription start site region 81697
Tssr81698	8	71272495 to 71272512	17	-	TSS region	transcription start site region 81698
Tssr77838	8	71272690 to 71272746	56	+	TSS region	transcription start site region 77838
Myo9b	8	71272714 to 71360713	87999	+	protein coding gene	myosin IXb
Tssr77839	8	71272749 to 71272784	35	+	TSS region	transcription start site region 77839
Tssr81699	8	71273136 to 71273159	23	-	TSS region	transcription start site region 81699
D8Ertd674e	8	71277819 to 71278025	206		DNA segment	DNA segment, Chr 8, ERATO Doi 674, expressed
Aevm1	8	71287817 to 71287993	176		QTL	autoimmune extremity vasculitis in MRL mice 1
D8Mit31	8	71287817 to 71287993	176		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 31
Tssr77840	8	71310680 to 71310710	30	+	TSS region	transcription start site region 77840
D8Mit233	8	71322450 to 71322762	312		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 233
Tssr77841	8	71330709 to 71330745	36	+	TSS region	transcription start site region 77841
Tssr77842	8	71337417 to 71337431	14	+	TSS region	transcription start site region 77842
Tssr77843	8	71346151 to 71346154	3	+	TSS region	transcription start site region 77843
Cpgi20521	8	71366824 to 71368094	1270		CpG island	CpG island 20521
Use1	8	71366848 to 71369732	2884	+	protein coding gene	unconventional SNARE in the ER 1 homolog (S. cerevisiae)
Tssr77844	8	71366870 to 71366946	76	+	TSS region	transcription start site region 77844
Tssr77845	8	71367210 to 71367238	28	+	TSS region	transcription start site region 77845
Tssr2602	8	71367430 to 71367443	13	-	TSS region	transcription start site region 2602
Tssr77846	8	71367496 to 71367540	44	+	TSS region	transcription start site region 77846
Tssr77847	8	71367553 to 71367632	79	+	TSS region	transcription start site region 77847
Tssr77848	8	71367636 to 71367647	11	+	TSS region	transcription start site region 77848
Cpgi20522	8	71371199 to 71372100	901		CpG island	CpG island 20522
Tssr77849	8	71371283 to 71371359	76	+	TSS region	transcription start site region 77849
Ocel1	8	71371298 to 71373689	2391	+	protein coding gene	occludin/ELL domain containing 1
Tssr77850	8	71371633 to 71371644	11	+	TSS region	transcription start site region 77850
Tssr77851	8	71371775 to 71371822	47	+	TSS region	transcription start site region 77851
Tssr77852	8	71371825 to 71371832	7	+	TSS region	transcription start site region 77852
Nr2f6	8	71374118 to 71381952	7834	-	protein coding gene	nuclear receptor subfamily 2, group F, member 6
Cpgi20523	8	71375412 to 71376632	1220		CpG island	CpG island 20523
Cpgi20524	8	71380281 to 71382889	2608		CpG island	CpG island 20524
Orq1	8	123895615 to 71287817	-52607798		QTL	ovulation rate QTL 1
W3q5	8	123895615 to 71287817	-52607798		QTL	weight 3 weeks QTL 5