Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:71083949-71364453

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W10q14 8 32016544 to 71287993 39271449 QTL weight 10 weeks QTL 14
Orq3 8 32016544 to 71287993 39271449 QTL ovulation rate QTL 3
W6q9 8 32016544 to 71287993 39271449 QTL weight 6 weeks QTL 9
Egq12 8 32016544 to 71287993 39271449 QTL early growth QTL 12
Gm35256 8 71026792 to 71126576 99784 + lincRNA gene predicted gene, 35256
Gm17576 8 71042295 to 71085766 43471 - lncRNA gene predicted gene, 17576
Tssr81691 8 71085726 to 71085729 3 - TSS region transcription start site region 81691
Tssr81692 8 71085758 to 71085763 5 - TSS region transcription start site region 81692
Gm3643 8 71086005 to 71108291 22286 + unclassified gene predicted gene 3643
Gm7827 8 71091701 to 71171456 79755 + protein coding gene predicted gene 7827
Gm27628 8 71119342 to 71119448 106 + miRNA gene predicted gene, 27628
D8Mit27a 8 71136783 to 71136987 204 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 27a
Char2a 8 71136783 to 90202598 19065815 QTL P. chabaudi malaria resistance QTL 2a
D8Mit72a 8 71136855 to 71137028 173 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 72a
Gm38415 8 71166044 to 71206948 40904 - lncRNA gene predicted gene, 38415
Gm29701 8 71214298 to 71216456 2158 - pseudogene predicted gene, 29701
Aprt-ps 8 71223949 to 71224453 504 + pseudogene adenine phosphoribosyl transferase, pseudogene
Tssr77837 8 71227132 to 71227134 2 + TSS region transcription start site region 77837
Haus8 8 71251124 to 71272590 21466 - protein coding gene 4HAUS augmin-like complex, subunit 8
Cpgi20520 8 71272087 to 71273376 1289 CpG island CpG island 20520
Tssr81693 8 71272313 to 71272321 8 - TSS region transcription start site region 81693
Tssr81694 8 71272338 to 71272351 13 - TSS region transcription start site region 81694
Tssr81695 8 71272367 to 71272382 15 - TSS region transcription start site region 81695
Tssr81696 8 71272419 to 71272435 16 - TSS region transcription start site region 81696
Tssr81697 8 71272448 to 71272478 30 - TSS region transcription start site region 81697
Tssr81698 8 71272495 to 71272512 17 - TSS region transcription start site region 81698
Tssr77838 8 71272690 to 71272746 56 + TSS region transcription start site region 77838
Myo9b 8 71272714 to 71360713 87999 + protein coding gene myosin IXb
Tssr77839 8 71272749 to 71272784 35 + TSS region transcription start site region 77839
Tssr81699 8 71273136 to 71273159 23 - TSS region transcription start site region 81699
D8Ertd674e 8 71277819 to 71278025 206 DNA segment DNA segment, Chr 8, ERATO Doi 674, expressed
Aevm1 8 71287817 to 71287993 176 QTL autoimmune extremity vasculitis in MRL mice 1
D8Mit31 8 71287817 to 71287993 176 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 31
Tssr77840 8 71310680 to 71310710 30 + TSS region transcription start site region 77840
D8Mit233 8 71322450 to 71322762 312 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 233
Tssr77841 8 71330709 to 71330745 36 + TSS region transcription start site region 77841
Tssr77842 8 71337417 to 71337431 14 + TSS region transcription start site region 77842
Tssr77843 8 71346151 to 71346154 3 + TSS region transcription start site region 77843
W3q5 8 123895615 to 71287817 -52607798 QTL weight 3 weeks QTL 5
Orq1 8 123895615 to 71287817 -52607798 QTL ovulation rate QTL 1