Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:70896728-71136755

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae36 8 14723160 to 71045600 56322440 QTL experimental allergic encephalomyelitis susceptibility 36
Rpl18a 8 70894722 to 70897412 2690 - protein coding gene ribosomal protein L18A
Cpgi20518 8 70896703 to 70897872 1169 CpG island CpG island 20518
Tssr81689 8 70897407 to 70897423 16 - TSS region transcription start site region 81689
Tssr81690 8 70897437 to 70897448 11 - TSS region transcription start site region 81690
Tssr77834 8 70897625 to 70897670 45 + TSS region transcription start site region 77834
Cpgi20519 8 70905470 to 70906802 1332 CpG island CpG island 20519
Tssr77835 8 70905970 to 70906017 47 + TSS region transcription start site region 77835
Map1s 8 70905974 to 70917529 11555 + protein coding gene microtubule-associated protein 1S
Mir1969 8 70925525 to 70925618 93 + miRNA gene microRNA 1969
Gm10654 8 70931405 to 70933037 1632 + protein coding gene predicted gene 10654
1700026F02Rik 8 71006728 to 71026755 20027 - lincRNA gene RIKEN cDNA 1700026F02 gene
D8Mit179.1 8 71012779 to 71012889 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 179.1
D8Mit179 8 71012950 to 71013088 138 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 179
D8Mit179.2 8 71013003 to 71013112 109 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 179.2
Tssr77836 8 71026588 to 71026630 42 + TSS region transcription start site region 77836
Gm35256 8 71026792 to 71126576 99784 + lincRNA gene predicted gene, 35256
Gm18209 8 71040837 to 71041758 921 - pseudogene predicted gene, 18209
Gm17576 8 71042295 to 71085766 43471 - lncRNA gene predicted gene, 17576
D8Mit178 8 71045453 to 71045600 147 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 178
Vmn2r-ps90 8 71059326 to 71074910 15584 - pseudogene vomeronasal 2, receptor, pseudogene 90
Tssr81691 8 71085726 to 71085729 3 - TSS region transcription start site region 81691
Tssr81692 8 71085758 to 71085763 5 - TSS region transcription start site region 81692
Gm3643 8 71086005 to 71108291 22286 + unclassified gene predicted gene 3643
Gm7827 8 71091701 to 71171456 79755 + protein coding gene predicted gene 7827
Gm27628 8 71119342 to 71119448 106 + miRNA gene predicted gene, 27628