MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:70881405-70983037

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc5a5	8	70882889 to 70892757	9868	-	protein coding gene	solute carrier family 5 (sodium iodide symporter), member 5
Cpgi20516	8	70887757 to 70887987	230		CpG island	CpG island 20516
Tssr81685	8	70887834 to 70887894	60	-	TSS region	transcription start site region 81685
Cpgi20517	8	70891249 to 70893267	2018		CpG island	CpG island 20517
Tssr81686	8	70892752 to 70892758	6	-	TSS region	transcription start site region 81686
Rpl18a	8	70894722 to 70897412	2690	-	protein coding gene	ribosomal protein L18A
Mir7067	8	70895508 to 70895570	62	-	miRNA gene	microRNA 7067
Tssr81687	8	70895713 to 70895719	6	-	TSS region	transcription start site region 81687
Snora68	8	70895759 to 70895856	97	-	snoRNA gene	small nucleolar RNA, H/ACA box 68
Tssr81688	8	70895883 to 70895889	6	-	TSS region	transcription start site region 81688
Cpgi20518	8	70896703 to 70897872	1169		CpG island	CpG island 20518
Tssr81689	8	70897407 to 70897423	16	-	TSS region	transcription start site region 81689
Tssr81690	8	70897437 to 70897448	11	-	TSS region	transcription start site region 81690
Tssr77834	8	70897625 to 70897670	45	+	TSS region	transcription start site region 77834
Cpgi20519	8	70905470 to 70906802	1332		CpG island	CpG island 20519
Tssr77835	8	70905970 to 70906017	47	+	TSS region	transcription start site region 77835
Map1s	8	70905974 to 70917529	11555	+	protein coding gene	microtubule-associated protein 1S
Mir1969	8	70925525 to 70925618	93	+	miRNA gene	microRNA 1969
Gm10654	8	70931405 to 70933037	1632	+	protein coding gene	predicted gene 10654