Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:70502547-70694210

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114 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Crlf1 8 70493158 to 70504081 10923 + protein coding gene cytokine receptor-like factor 1
Cpgi20466 8 70502877 to 70503903 1026 CpG island CpG island 20466
Rex1bd 8 70504292 to 70506752 2460 - protein coding gene required for excision 1-B domain containing
Cpgi20467 8 70505680 to 70506822 1142 CpG island CpG island 20467
Tssr81622 8 70506119 to 70506143 24 - TSS region transcription start site region 81622
Tssr81623 8 70506346 to 70506376 30 - TSS region transcription start site region 81623
Tssr81624 8 70506710 to 70506766 56 - TSS region transcription start site region 81624
Uba52 8 70508266 to 70510367 2101 - protein coding gene ubiquitin A-52 residue ribosomal protein fusion product 1
Cpgi20468 8 70509757 to 70510860 1103 CpG island CpG island 20468
Tssr81625 8 70510322 to 70510422 100 - TSS region transcription start site region 81625
Tssr77748 8 70510448 to 70510520 72 + TSS region transcription start site region 77748
4930522P08Rik 8 70510474 to 70512652 2178 + unclassified non-coding RNA gene RIKEN cDNA 4930522P08 gene
Tssr77749 8 70510526 to 70510548 22 + TSS region transcription start site region 77749
Tssr81626 8 70510552 to 70510584 32 - TSS region transcription start site region 81626
Tssr77750 8 70511554 to 70511562 8 + TSS region transcription start site region 77750
Kxd1 8 70513396 to 70523180 9784 - protein coding gene KxDL motif containing 1
Tssr77751 8 70514061 to 70514090 29 + TSS region transcription start site region 77751
Cpgi20469 8 70522783 to 70523309 526 CpG island CpG island 20469
Tssr81627 8 70522947 to 70522983 36 - TSS region transcription start site region 81627
Tssr81628 8 70523085 to 70523114 29 - TSS region transcription start site region 81628
Tssr2597 8 70523170 to 70523178 8 - TSS region transcription start site region 2597
Cpgi20470 8 70527428 to 70528349 921 CpG island CpG island 20470
Tssr81629 8 70527645 to 70527696 51 - TSS region transcription start site region 81629
Fkbp8 8 70527724 to 70535328 7604 + protein coding gene FK506 binding protein 8
Tssr77752 8 70527737 to 70527766 29 + TSS region transcription start site region 77752
Tssr77753 8 70527799 to 70527810 11 + TSS region transcription start site region 77753
Tssr77754 8 70527829 to 70527840 11 + TSS region transcription start site region 77754
Tssr81630 8 70527936 to 70527942 6 - TSS region transcription start site region 81630
Tssr81631 8 70527945 to 70527982 37 - TSS region transcription start site region 81631
Tssr77755 8 70527993 to 70528018 25 + TSS region transcription start site region 77755
Tssr77756 8 70528020 to 70528038 18 + TSS region transcription start site region 77756
Tssr77757 8 70529378 to 70529384 6 + TSS region transcription start site region 77757
Tssr77758 8 70529539 to 70529562 23 + TSS region transcription start site region 77758
Tssr77759 8 70529598 to 70529640 42 + TSS region transcription start site region 77759
Tssr77760 8 70531518 to 70531546 28 + TSS region transcription start site region 77760
Tssr77761 8 70531614 to 70531625 11 + TSS region transcription start site region 77761
Tssr77762 8 70534271 to 70534289 18 + TSS region transcription start site region 77762
Tssr77763 8 70534909 to 70534996 87 + TSS region transcription start site region 77763
Tssr77764 8 70534999 to 70535035 36 + TSS region transcription start site region 77764
Cpgi20471 8 70538339 to 70540034 1695 CpG island CpG island 20471
Ell 8 70539675 to 70592858 53183 + protein coding gene elongation factor RNA polymerase II
Tssr77765 8 70539685 to 70539710 25 + TSS region transcription start site region 77765
Tssr2598 8 70544186 to 70544189 3 - TSS region transcription start site region 2598
Tssr77766 8 70579858 to 70579861 3 + TSS region transcription start site region 77766
Tssr77767 8 70583534 to 70583537 3 + TSS region transcription start site region 77767
Cpgi20472 8 70594055 to 70595544 1489 CpG island CpG island 20472
Tssr77768 8 70594176 to 70594210 34 + TSS region transcription start site region 77768
Tssr77769 8 70594361 to 70594372 11 + TSS region transcription start site region 77769
Tssr77770 8 70594375 to 70594396 21 + TSS region transcription start site region 77770
Tssr77771 8 70594401 to 70594412 11 + TSS region transcription start site region 77771
Tssr77772 8 70594425 to 70594440 15 + TSS region transcription start site region 77772
Tssr77773 8 70594466 to 70594512 46 + TSS region transcription start site region 77773
Isyna1 8 70594481 to 70597290 2809 + protein coding gene myo-inositol 1-phosphate synthase A1
Tssr77774 8 70594613 to 70594649 36 + TSS region transcription start site region 77774
Tssr77775 8 70595044 to 70595073 29 + TSS region transcription start site region 77775
Tssr77776 8 70596825 to 70596851 26 + TSS region transcription start site region 77776
Ssbp4 8 70597485 to 70608381 10896 - protein coding gene single stranded DNA binding protein 4
Cpgi20473 8 70597547 to 70599210 1663 CpG island CpG island 20473
Tssr81632 8 70598424 to 70598441 17 - TSS region transcription start site region 81632
Tssr81633 8 70599414 to 70599442 28 - TSS region transcription start site region 81633
Tssr81634 8 70599724 to 70599746 22 - TSS region transcription start site region 81634
Cpgi20474 8 70601318 to 70601591 273 CpG island CpG island 20474
Tssr81635 8 70601329 to 70601370 41 - TSS region transcription start site region 81635
Cpgi20475 8 70607598 to 70608767 1169 CpG island CpG island 20475
Tssr81636 8 70608261 to 70608330 69 - TSS region transcription start site region 81636
Cpgi20476 8 70609006 to 70610484 1478 CpG island CpG island 20476
Tssr77777 8 70610390 to 70610412 22 + TSS region transcription start site region 77777
Gm45546 8 70610425 to 70612818 2393 + unclassified gene predicted gene 45546
Tssr77778 8 70610699 to 70610718 19 + TSS region transcription start site region 77778
Cpgi20477 8 70610912 to 70611880 968 CpG island CpG island 20477
Tssr77779 8 70616102 to 70616113 11 + TSS region transcription start site region 77779
Tssr77780 8 70616114 to 70616140 26 + TSS region transcription start site region 77780
Tssr77781 8 70616147 to 70616161 14 + TSS region transcription start site region 77781
Tssr77782 8 70616666 to 70616684 18 + TSS region transcription start site region 77782
Tssr81637 8 70616715 to 70616741 26 - TSS region transcription start site region 81637
Tssr77783 8 70616816 to 70616930 114 + TSS region transcription start site region 77783
Lrrc25 8 70616844 to 70620850 4006 + protein coding gene leucine rich repeat containing 25
Tssr77784 8 70616937 to 70616948 11 + TSS region transcription start site region 77784
Tssr77785 8 70616975 to 70616986 11 + TSS region transcription start site region 77785
Tssr77786 8 70617721 to 70617740 19 + TSS region transcription start site region 77786
Tssr77787 8 70617797 to 70617829 32 + TSS region transcription start site region 77787
Tssr77788 8 70617912 to 70617970 58 + TSS region transcription start site region 77788
Tssr77789 8 70618091 to 70618107 16 + TSS region transcription start site region 77789
Tssr77790 8 70618137 to 70618170 33 + TSS region transcription start site region 77790
Tssr81638 8 70618774 to 70618809 35 - TSS region transcription start site region 81638
Tssr77791 8 70619183 to 70619193 10 + TSS region transcription start site region 77791
Cpgi20478 8 70620892 to 70621091 199 CpG island CpG island 20478
Gdf15 8 70629393 to 70632456 3063 - protein coding gene growth differentiation factor 15
Cpgi20479 8 70629512 to 70630398 886 CpG island CpG island 20479
Cpgi20480 8 70631295 to 70631728 433 CpG island CpG island 20480
Tssr81639 8 70631631 to 70631640 9 - TSS region transcription start site region 81639
Tssr81640 8 70632419 to 70632461 42 - TSS region transcription start site region 81640
Gm34154 8 70632518 to 70637910 5392 + lncRNA gene predicted gene, 34154
Tssr81641 8 70638868 to 70638879 11 - TSS region transcription start site region 81641
Pgpep1 8 70646436 to 70659856 13420 - protein coding gene pyroglutamyl-peptidase I
Tssr81642 8 70647126 to 70647133 7 - TSS region transcription start site region 81642
Tssr81643 8 70648373 to 70648377 4 - TSS region transcription start site region 81643
Tssr77792 8 70649540 to 70649549 9 + TSS region transcription start site region 77792
Tssr77793 8 70649644 to 70649665 21 + TSS region transcription start site region 77793
Tssr81644 8 70650419 to 70650431 12 - TSS region transcription start site region 81644
Cpgi20481 8 70659094 to 70660367 1273 CpG island CpG island 20481
Tssr81645 8 70659645 to 70659696 51 - TSS region transcription start site region 81645
Tssr81646 8 70659823 to 70659839 16 - TSS region transcription start site region 81646
Tssr77794 8 70659965 to 70659980 15 + TSS region transcription start site region 77794
Cpgi20482 8 70672974 to 70673788 814 CpG island CpG island 20482
Tssr77795 8 70673198 to 70673267 69 + TSS region transcription start site region 77795
Lsm4 8 70673248 to 70678752 5504 + protein coding gene LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
Tssr77796 8 70673364 to 70673428 64 + TSS region transcription start site region 77796
Tssr77797 8 70673738 to 70673759 21 + TSS region transcription start site region 77797
Tssr77798 8 70673768 to 70673784 16 + TSS region transcription start site region 77798
Tssr2599 8 70676184 to 70676222 38 + TSS region transcription start site region 2599
Cpgi20483 8 70682309 to 70682509 200 CpG island CpG island 20483
Gm39191 8 70683309 to 70692591 9282 - lncRNA gene predicted gene, 39191
Cpgi20484 8 70691853 to 70692296 443 CpG island CpG island 20484