Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:70321526-70583077

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cers1 8 70315775 to 70331588 15813 + protein coding gene ceramide synthase 1
Gdf1 8 70329817 to 70331587 1770 + protein coding gene growth differentiation factor 1
Cpgi20451 8 70329878 to 70331833 1955 CpG island CpG island 20451
Tssr77732 8 70329882 to 70329904 22 + TSS region transcription start site region 77732
Tssr77733 8 70329907 to 70329929 22 + TSS region transcription start site region 77733
Upf1 8 70331525 to 70353278 21753 - protein coding gene UPF1 regulator of nonsense transcripts homolog (yeast)
Tssr81609 8 70331940 to 70331944 4 - TSS region transcription start site region 81609
Cpgi20452 8 70332055 to 70332600 545 CpG island CpG island 20452
Cpgi20453 8 70352074 to 70353900 1826 CpG island CpG island 20453
Tssr77734 8 70352765 to 70352787 22 + TSS region transcription start site region 77734
Tssr81610 8 70353243 to 70353336 93 - TSS region transcription start site region 81610
Cpgi20454 8 70373451 to 70377323 3872 CpG island CpG island 20454
Tssr77735 8 70373541 to 70373558 17 + TSS region transcription start site region 77735
Comp 8 70373558 to 70382066 8508 + protein coding gene cartilage oligomeric matrix protein
Tssr77736 8 70374927 to 70374934 7 + TSS region transcription start site region 77736
Tssr77737 8 70374961 to 70374974 13 + TSS region transcription start site region 77737
Tssr77738 8 70374982 to 70375004 22 + TSS region transcription start site region 77738
Tssr77739 8 70376301 to 70376321 20 + TSS region transcription start site region 77739
Tssr77740 8 70376599 to 70376630 31 + TSS region transcription start site region 77740
Tssr77741 8 70376802 to 70376826 24 + TSS region transcription start site region 77741
Crtc1 8 70382355 to 70439579 57224 - protein coding gene CREB regulated transcription coactivator 1
Tssr81611 8 70382521 to 70382523 2 - TSS region transcription start site region 81611
Cpgi20455 8 70419022 to 70419194 172 CpG island CpG island 20455
Tssr81612 8 70420011 to 70420043 32 - TSS region transcription start site region 81612
Cpgi20456 8 70438986 to 70440212 1226 CpG island CpG island 20456
Tssr81613 8 70439557 to 70439612 55 - TSS region transcription start site region 81613
Tssr77742 8 70439775 to 70439808 33 + TSS region transcription start site region 77742
Klhl26 8 70450219 to 70476968 26749 - protein coding gene kelch-like 26
Cpgi20457 8 70451526 to 70453077 1551 CpG island CpG island 20457
Cpgi20458 8 70476291 to 70477262 971 CpG island CpG island 20458
Tssr81614 8 70476911 to 70476969 58 - TSS region transcription start site region 81614
Tssr81615 8 70476977 to 70476993 16 - TSS region transcription start site region 81615
Tmem59l 8 70483867 to 70487358 3491 - protein coding gene transmembrane protein 59-like
Tssr81616 8 70485717 to 70485740 23 - TSS region transcription start site region 81616
Cpgi20459 8 70487070 to 70487494 424 CpG island CpG island 20459
Tssr81617 8 70487214 to 70487225 11 - TSS region transcription start site region 81617
Tssr81618 8 70487314 to 70487381 67 - TSS region transcription start site region 81618
Cpgi20460 8 70488083 to 70489009 926 CpG island CpG island 20460
Tssr81619 8 70488115 to 70488126 11 - TSS region transcription start site region 81619
1700020G03Rik 8 70488181 to 70489069 888 + lncRNA gene RIKEN cDNA 1700020G03 gene
Tssr81620 8 70488476 to 70488507 31 - TSS region transcription start site region 81620
Tssr81621 8 70488511 to 70488521 10 - TSS region transcription start site region 81621
Cpgi20461 8 70489287 to 70490236 949 CpG island CpG island 20461
Cpgi20462 8 70491998 to 70494810 2812 CpG island CpG island 20462
Tssr77743 8 70493117 to 70493128 11 + TSS region transcription start site region 77743
Tssr77744 8 70493140 to 70493154 14 + TSS region transcription start site region 77744
Tssr77745 8 70493156 to 70493167 11 + TSS region transcription start site region 77745
Crlf1 8 70493158 to 70504081 10923 + protein coding gene cytokine receptor-like factor 1
Cpgi20463 8 70495609 to 70495867 258 CpG island CpG island 20463
Tssr77746 8 70498621 to 70498625 4 + TSS region transcription start site region 77746
Cpgi20464 8 70500857 to 70501321 464 CpG island CpG island 20464
Tssr77747 8 70501116 to 70501172 56 + TSS region transcription start site region 77747
Cpgi20465 8 70502291 to 70502493 202 CpG island CpG island 20465
Cpgi20466 8 70502877 to 70503903 1026 CpG island CpG island 20466
Rex1bd 8 70504292 to 70506752 2460 - protein coding gene required for excision 1-B domain containing
Cpgi20467 8 70505680 to 70506822 1142 CpG island CpG island 20467
Tssr81622 8 70506119 to 70506143 24 - TSS region transcription start site region 81622
Tssr81623 8 70506346 to 70506376 30 - TSS region transcription start site region 81623
Tssr81624 8 70506710 to 70506766 56 - TSS region transcription start site region 81624
Uba52 8 70508266 to 70510367 2101 - protein coding gene ubiquitin A-52 residue ribosomal protein fusion product 1
Cpgi20468 8 70509757 to 70510860 1103 CpG island CpG island 20468
Tssr81625 8 70510322 to 70510422 100 - TSS region transcription start site region 81625
Tssr77748 8 70510448 to 70510520 72 + TSS region transcription start site region 77748
4930522P08Rik 8 70510474 to 70512652 2178 + unclassified non-coding RNA gene RIKEN cDNA 4930522P08 gene
Tssr77749 8 70510526 to 70510548 22 + TSS region transcription start site region 77749
Tssr81626 8 70510552 to 70510584 32 - TSS region transcription start site region 81626
Tssr77750 8 70511554 to 70511562 8 + TSS region transcription start site region 77750
Kxd1 8 70513396 to 70523180 9784 - protein coding gene KxDL motif containing 1
Tssr77751 8 70514061 to 70514090 29 + TSS region transcription start site region 77751
Cpgi20469 8 70522783 to 70523309 526 CpG island CpG island 20469
Tssr81627 8 70522947 to 70522983 36 - TSS region transcription start site region 81627
Tssr81628 8 70523085 to 70523114 29 - TSS region transcription start site region 81628
Tssr2597 8 70523170 to 70523178 8 - TSS region transcription start site region 2597
Cpgi20470 8 70527428 to 70528349 921 CpG island CpG island 20470
Tssr81629 8 70527645 to 70527696 51 - TSS region transcription start site region 81629
Fkbp8 8 70527724 to 70535328 7604 + protein coding gene FK506 binding protein 8
Tssr77752 8 70527737 to 70527766 29 + TSS region transcription start site region 77752
Tssr77753 8 70527799 to 70527810 11 + TSS region transcription start site region 77753
Tssr77754 8 70527829 to 70527840 11 + TSS region transcription start site region 77754
Tssr81630 8 70527936 to 70527942 6 - TSS region transcription start site region 81630
Tssr81631 8 70527945 to 70527982 37 - TSS region transcription start site region 81631
Tssr77755 8 70527993 to 70528018 25 + TSS region transcription start site region 77755
Tssr77756 8 70528020 to 70528038 18 + TSS region transcription start site region 77756
Tssr77757 8 70529378 to 70529384 6 + TSS region transcription start site region 77757
Tssr77758 8 70529539 to 70529562 23 + TSS region transcription start site region 77758
Tssr77759 8 70529598 to 70529640 42 + TSS region transcription start site region 77759
Tssr77760 8 70531518 to 70531546 28 + TSS region transcription start site region 77760
Tssr77761 8 70531614 to 70531625 11 + TSS region transcription start site region 77761
Tssr77762 8 70534271 to 70534289 18 + TSS region transcription start site region 77762
Tssr77763 8 70534909 to 70534996 87 + TSS region transcription start site region 77763
Tssr77764 8 70534999 to 70535035 36 + TSS region transcription start site region 77764
Cpgi20471 8 70538339 to 70540034 1695 CpG island CpG island 20471
Ell 8 70539675 to 70592858 53183 + protein coding gene elongation factor RNA polymerase II
Tssr77765 8 70539685 to 70539710 25 + TSS region transcription start site region 77765
Tssr2598 8 70544186 to 70544189 3 - TSS region transcription start site region 2598
Tssr77766 8 70579858 to 70579861 3 + TSS region transcription start site region 77766