Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:69836985-69967007

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbx4 8 69832491 to 69872292 39801 + protein coding gene pre B cell leukemia homeobox 4
Tssr77688 8 69849321 to 69849341 20 + TSS region transcription start site region 77688
Cilp2 8 69880366 to 69887392 7026 - protein coding gene cartilage intermediate layer protein 2
Cpgi20423 8 69880727 to 69883505 2778 CpG island CpG island 20423
Tssr81538 8 69882162 to 69882176 14 - TSS region transcription start site region 81538
Gm33746 8 69882980 to 69888384 5404 + lncRNA gene predicted gene, 33746
Cpgi20424 8 69885368 to 69885558 190 CpG island CpG island 20424
Cpgi20425 8 69885811 to 69886738 927 CpG island CpG island 20425
Cpgi20426 8 69887098 to 69888327 1229 CpG island CpG island 20426
Tssr81539 8 69887381 to 69887401 20 - TSS region transcription start site region 81539
Yjefn3 8 69887788 to 69902712 14924 - protein coding gene YjeF N-terminal domain containing 3
Tssr81540 8 69888201 to 69888215 14 - TSS region transcription start site region 81540
Tssr81541 8 69888230 to 69888237 7 - TSS region transcription start site region 81541
Cpgi20427 8 69888601 to 69889700 1099 CpG island CpG island 20427
Tssr81542 8 69893979 to 69893984 5 - TSS region transcription start site region 81542
Ndufa13 8 69894180 to 69902558 8378 - protein coding gene NADH:ubiquinone oxidoreductase subunit A13
Tssr81543 8 69901134 to 69901135 1 - TSS region transcription start site region 81543
Cpgi20428 8 69901395 to 69903591 2196 CpG island CpG island 20428
Tssr81544 8 69901632 to 69901657 25 - TSS region transcription start site region 81544
Tssr81545 8 69901661 to 69901672 11 - TSS region transcription start site region 81545
Tssr2594 8 69901768 to 69901796 28 + TSS region transcription start site region 2594
Tssr81546 8 69901985 to 69902007 22 - TSS region transcription start site region 81546
Tssr81547 8 69902015 to 69902024 9 - TSS region transcription start site region 81547
Tssr77689 8 69902178 to 69902194 16 + TSS region transcription start site region 77689
Tssk6 8 69902184 to 69903518 1334 + protein coding gene testis-specific serine kinase 6
Tssr81548 8 69903158 to 69903222 64 - TSS region transcription start site region 81548
Gatad2a 8 69907076 to 69996384 89308 - protein coding gene GATA zinc finger domain containing 2A
Tssr81549 8 69908882 to 69908906 24 - TSS region transcription start site region 81549
Tssr81550 8 69908915 to 69908926 11 - TSS region transcription start site region 81550
Tssr81551 8 69909372 to 69909389 17 - TSS region transcription start site region 81551
Tssr81552 8 69911673 to 69911677 4 - TSS region transcription start site region 81552
Tssr81553 8 69917490 to 69917519 29 - TSS region transcription start site region 81553
Tssr81554 8 69924795 to 69924798 3 - TSS region transcription start site region 81554
Tssr81555 8 69936497 to 69936510 13 - TSS region transcription start site region 81555
Tssr81556 8 69958419 to 69958435 16 - TSS region transcription start site region 81556