Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:69782392-69882983

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39189 8 69787010 to 69791199 4189 - lncRNA gene predicted gene, 39189
Cpgi20418 8 69790845 to 69791907 1062 CpG island CpG island 20418
Atp13a1 8 69791163 to 69807749 16586 + protein coding gene ATPase type 13A1
Tssr81537 8 69791170 to 69791212 42 - TSS region transcription start site region 81537
Tssr77670 8 69791221 to 69791257 36 + TSS region transcription start site region 77670
Tssr77671 8 69797787 to 69797808 21 + TSS region transcription start site region 77671
Cpgi20419 8 69808525 to 69809394 869 CpG island CpG island 20419
Tssr77672 8 69808672 to 69808742 70 + TSS region transcription start site region 77672
Gmip 8 69808679 to 69821870 13191 + protein coding gene Gem-interacting protein
Tssr77673 8 69811659 to 69811672 13 + TSS region transcription start site region 77673
Tssr77674 8 69811894 to 69811908 14 + TSS region transcription start site region 77674
Tssr77675 8 69812337 to 69812353 16 + TSS region transcription start site region 77675
Tssr77676 8 69812398 to 69812415 17 + TSS region transcription start site region 77676
Tssr77677 8 69812649 to 69812664 15 + TSS region transcription start site region 77677
Gm33695 8 69813310 to 69814081 771 - lncRNA gene predicted gene, 33695
Tssr77678 8 69816798 to 69816831 33 + TSS region transcription start site region 77678
Cpgi20420 8 69822053 to 69822260 207 CpG island CpG island 20420
Tssr77679 8 69822154 to 69822165 11 + TSS region transcription start site region 77679
Cpgi20421 8 69822530 to 69822827 297 CpG island CpG island 20421
Tssr77680 8 69822562 to 69822592 30 + TSS region transcription start site region 77680
Lpar2 8 69822565 to 69831102 8537 + protein coding gene lysophosphatidic acid receptor 2
Tssr77681 8 69822597 to 69822635 38 + TSS region transcription start site region 77681
Tssr77682 8 69822646 to 69822657 11 + TSS region transcription start site region 77682
Cpgi20422 8 69832392 to 69832983 591 CpG island CpG island 20422
Tssr77683 8 69832485 to 69832535 50 + TSS region transcription start site region 77683
Pbx4 8 69832491 to 69872292 39801 + protein coding gene pre B cell leukemia homeobox 4
Tssr77684 8 69832633 to 69832712 79 + TSS region transcription start site region 77684
Tssr77685 8 69832745 to 69832754 9 + TSS region transcription start site region 77685
Tssr77686 8 69832762 to 69832781 19 + TSS region transcription start site region 77686
Tssr77687 8 69832798 to 69832809 11 + TSS region transcription start site region 77687
Tssr77688 8 69849321 to 69849341 20 + TSS region transcription start site region 77688
Cilp2 8 69880366 to 69887392 7026 - protein coding gene cartilage intermediate layer protein 2
Cpgi20423 8 69880727 to 69883505 2778 CpG island CpG island 20423
Tssr81538 8 69882162 to 69882176 14 - TSS region transcription start site region 81538
Gm33746 8 69882980 to 69888384 5404 + lncRNA gene predicted gene, 33746