Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:69722381-70052401

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108 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp963 8 69741639 to 69749962 8323 - protein coding gene zinc finger protein 963
Gm20422 8 69742862 to 69774886 32024 - protein coding gene predicted gene 20422
Cpgi20416 8 69749523 to 69750151 628 CpG island CpG island 20416
1700093C20Rik 8 69749692 to 69750625 933 unclassified gene RIKEN cDNA 1700093C20 gene
Tssr81535 8 69749938 to 69749970 32 - TSS region transcription start site region 81535
Tssr2593 8 69749979 to 69749990 11 - TSS region transcription start site region 2593
Gm19893 8 69755790 to 69756396 606 + pseudogene predicted gene, 19893
Zfp866 8 69761324 to 69774911 13587 - protein coding gene zinc finger protein 866
Cpgi20417 8 69774525 to 69775036 511 CpG island CpG island 20417
Tssr81536 8 69774884 to 69774916 32 - TSS region transcription start site region 81536
Gm39189 8 69787010 to 69791199 4189 - lncRNA gene predicted gene, 39189
Cpgi20418 8 69790845 to 69791907 1062 CpG island CpG island 20418
Atp13a1 8 69791163 to 69807749 16586 + protein coding gene ATPase type 13A1
Tssr81537 8 69791170 to 69791212 42 - TSS region transcription start site region 81537
Tssr77670 8 69791221 to 69791257 36 + TSS region transcription start site region 77670
Tssr77671 8 69797787 to 69797808 21 + TSS region transcription start site region 77671
Cpgi20419 8 69808525 to 69809394 869 CpG island CpG island 20419
Tssr77672 8 69808672 to 69808742 70 + TSS region transcription start site region 77672
Gmip 8 69808679 to 69821870 13191 + protein coding gene Gem-interacting protein
Tssr77673 8 69811659 to 69811672 13 + TSS region transcription start site region 77673
Tssr77674 8 69811894 to 69811908 14 + TSS region transcription start site region 77674
Tssr77675 8 69812337 to 69812353 16 + TSS region transcription start site region 77675
Tssr77676 8 69812398 to 69812415 17 + TSS region transcription start site region 77676
Tssr77677 8 69812649 to 69812664 15 + TSS region transcription start site region 77677
Gm33695 8 69813310 to 69814081 771 - lncRNA gene predicted gene, 33695
Tssr77678 8 69816798 to 69816831 33 + TSS region transcription start site region 77678
Cpgi20420 8 69822053 to 69822260 207 CpG island CpG island 20420
Tssr77679 8 69822154 to 69822165 11 + TSS region transcription start site region 77679
Cpgi20421 8 69822530 to 69822827 297 CpG island CpG island 20421
Tssr77680 8 69822562 to 69822592 30 + TSS region transcription start site region 77680
Lpar2 8 69822565 to 69831102 8537 + protein coding gene lysophosphatidic acid receptor 2
Tssr77681 8 69822597 to 69822635 38 + TSS region transcription start site region 77681
Tssr77682 8 69822646 to 69822657 11 + TSS region transcription start site region 77682
Cpgi20422 8 69832392 to 69832983 591 CpG island CpG island 20422
Tssr77683 8 69832485 to 69832535 50 + TSS region transcription start site region 77683
Pbx4 8 69832491 to 69872292 39801 + protein coding gene pre B cell leukemia homeobox 4
Tssr77684 8 69832633 to 69832712 79 + TSS region transcription start site region 77684
Tssr77685 8 69832745 to 69832754 9 + TSS region transcription start site region 77685
Tssr77686 8 69832762 to 69832781 19 + TSS region transcription start site region 77686
Tssr77687 8 69832798 to 69832809 11 + TSS region transcription start site region 77687
Tssr77688 8 69849321 to 69849341 20 + TSS region transcription start site region 77688
Cilp2 8 69880366 to 69887392 7026 - protein coding gene cartilage intermediate layer protein 2
Cpgi20423 8 69880727 to 69883505 2778 CpG island CpG island 20423
Tssr81538 8 69882162 to 69882176 14 - TSS region transcription start site region 81538
Gm33746 8 69882980 to 69888384 5404 + lncRNA gene predicted gene, 33746
Cpgi20424 8 69885368 to 69885558 190 CpG island CpG island 20424
Cpgi20425 8 69885811 to 69886738 927 CpG island CpG island 20425
Cpgi20426 8 69887098 to 69888327 1229 CpG island CpG island 20426
Tssr81539 8 69887381 to 69887401 20 - TSS region transcription start site region 81539
Yjefn3 8 69887788 to 69902712 14924 - protein coding gene YjeF N-terminal domain containing 3
Tssr81540 8 69888201 to 69888215 14 - TSS region transcription start site region 81540
Tssr81541 8 69888230 to 69888237 7 - TSS region transcription start site region 81541
Cpgi20427 8 69888601 to 69889700 1099 CpG island CpG island 20427
Tssr81542 8 69893979 to 69893984 5 - TSS region transcription start site region 81542
Ndufa13 8 69894180 to 69902558 8378 - protein coding gene NADH:ubiquinone oxidoreductase subunit A13
Tssr81543 8 69901134 to 69901135 1 - TSS region transcription start site region 81543
Cpgi20428 8 69901395 to 69903591 2196 CpG island CpG island 20428
Tssr81544 8 69901632 to 69901657 25 - TSS region transcription start site region 81544
Tssr81545 8 69901661 to 69901672 11 - TSS region transcription start site region 81545
Tssr2594 8 69901768 to 69901796 28 + TSS region transcription start site region 2594
Tssr81546 8 69901985 to 69902007 22 - TSS region transcription start site region 81546
Tssr81547 8 69902015 to 69902024 9 - TSS region transcription start site region 81547
Tssr77689 8 69902178 to 69902194 16 + TSS region transcription start site region 77689
Tssk6 8 69902184 to 69903518 1334 + protein coding gene testis-specific serine kinase 6
Tssr81548 8 69903158 to 69903222 64 - TSS region transcription start site region 81548
Gatad2a 8 69907076 to 69996384 89308 - protein coding gene GATA zinc finger domain containing 2A
Tssr81549 8 69908882 to 69908906 24 - TSS region transcription start site region 81549
Tssr81550 8 69908915 to 69908926 11 - TSS region transcription start site region 81550
Tssr81551 8 69909372 to 69909389 17 - TSS region transcription start site region 81551
Tssr81552 8 69911673 to 69911677 4 - TSS region transcription start site region 81552
Tssr81553 8 69917490 to 69917519 29 - TSS region transcription start site region 81553
Tssr81554 8 69924795 to 69924798 3 - TSS region transcription start site region 81554
Tssr81555 8 69936497 to 69936510 13 - TSS region transcription start site region 81555
Tssr81556 8 69958419 to 69958435 16 - TSS region transcription start site region 81556
Cpgi20429 8 69973402 to 69974896 1494 CpG island CpG island 20429
Tssr81557 8 69974118 to 69974160 42 - TSS region transcription start site region 81557
Tssr81558 8 69974235 to 69974257 22 - TSS region transcription start site region 81558
Tssr81559 8 69974261 to 69974315 54 - TSS region transcription start site region 81559
Tssr81560 8 69974318 to 69974333 15 - TSS region transcription start site region 81560
Tssr81561 8 69974347 to 69974364 17 - TSS region transcription start site region 81561
Tssr81562 8 69974367 to 69974407 40 - TSS region transcription start site region 81562
Tssr81563 8 69978305 to 69978309 4 - TSS region transcription start site region 81563
Tssr81564 8 69984994 to 69984999 5 - TSS region transcription start site region 81564
Tssr81565 8 69986150 to 69986153 3 - TSS region transcription start site region 81565
Tssr81566 8 69989757 to 69989776 19 - TSS region transcription start site region 81566
Tssr81567 8 69995022 to 69995025 3 - TSS region transcription start site region 81567
Cpgi20430 8 69995561 to 69997073 1512 CpG island CpG island 20430
Tssr81568 8 69996090 to 69996108 18 - TSS region transcription start site region 81568
Tssr81569 8 69996116 to 69996154 38 - TSS region transcription start site region 81569
Tssr81570 8 69996222 to 69996236 14 - TSS region transcription start site region 81570
Tssr81571 8 69996240 to 69996258 18 - TSS region transcription start site region 81571
Tssr81572 8 69996263 to 69996298 35 - TSS region transcription start site region 81572
Tssr81573 8 69996326 to 69996349 23 - TSS region transcription start site region 81573
Tssr81574 8 69996368 to 69996388 20 - TSS region transcription start site region 81574
Tssr77690 8 69996738 to 69996807 69 + TSS region transcription start site region 77690
Tssr77691 8 70001408 to 70001419 11 + TSS region transcription start site region 77691
Tssr77692 8 70001423 to 70001458 35 + TSS region transcription start site region 77692
Gm7730 8 70010549 to 70011002 453 - pseudogene predicted gene 7730
Tssr81575 8 70011022 to 70011062 40 - TSS region transcription start site region 81575
Mau2 8 70016123 to 70042734 26611 - protein coding gene MAU2 sister chromatid cohesion factor
Tssr81576 8 70018618 to 70018621 3 - TSS region transcription start site region 81576
Tssr81577 8 70029511 to 70029516 5 - TSS region transcription start site region 81577
Cpgi20431 8 70041899 to 70043530 1631 CpG island CpG island 20431
Tssr81578 8 70042689 to 70042713 24 - TSS region transcription start site region 81578
Tssr77693 8 70042768 to 70042837 69 + TSS region transcription start site region 77693
Sugp1 8 70042785 to 70071964 29179 + protein coding gene SURP and G patch domain containing 1
Tssr77694 8 70043018 to 70043062 44 + TSS region transcription start site region 77694
Tssr77695 8 70043092 to 70043110 18 + TSS region transcription start site region 77695