MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:69265299-69525609

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D130040H23Rik	8	69271053 to 69303384	32331	+	protein coding gene	RIKEN cDNA D130040H23 gene
Tssr77667	8	69271090 to 69271143	53	+	TSS region	transcription start site region 77667
Gm7688	8	69329218 to 69329554	336	+	pseudogene	predicted gene 7688
E230024E03Rik	8	69366509 to 69369565	3056		unclassified gene	RIKEN cDNA E230024E03 gene
Gm10033	8	69371025 to 69395544	24519	-	pseudogene	predicted gene 10033
D8Mit130	8	69379377 to 69379526	149		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 130
Tssr81524	8	69387130 to 69387133	3	-	TSS region	transcription start site region 81524
Cpgi20410	8	69395299 to 69395609	310		CpG island	CpG island 20410
Tssr81525	8	69395492 to 69395553	61	-	TSS region	transcription start site region 81525
Tssr81526	8	69395564 to 69395575	11	-	TSS region	transcription start site region 81526
Cpgi20411	8	69399403 to 69399824	421		CpG island	CpG island 20411
Gm25661	8	69399725 to 69400020	295	+	ribozyme gene	predicted gene, 25661
Gm45848	8	69419497 to 69425233	5736	+	lincRNA gene	predicted gene 45848
Gm9495	8	69427980 to 69453565	25585	-	protein coding gene	predicted gene 9495
Tssr81527	8	69453537 to 69453582	45	-	TSS region	transcription start site region 81527
Gm45850	8	69470069 to 69470406	337	+	pseudogene	predicted gene 45850
Gm43263	8	69473492 to 69474842	1350	-	lincRNA gene	predicted gene 43263
Gm7697	8	69482621 to 69522925	40304	-	protein coding gene	predicted gene 7697
Tssr81528	8	69522957 to 69522994	37	-	TSS region	transcription start site region 81528