Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:69061090-69481143

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc18a1 8 69037711 to 69089235 51524 - protein coding gene solute carrier family 18 (vesicular monoamine), member 1
Gm15716 8 69044754 to 69063422 18668 + antisense lncRNA gene predicted gene 15716
Tssr81514 8 69077221 to 69077243 22 - TSS region transcription start site region 81514
Tssr81515 8 69077252 to 69077269 17 - TSS region transcription start site region 81515
Tssr81516 8 69077452 to 69077463 11 - TSS region transcription start site region 81516
Tssr81517 8 69084848 to 69084855 7 - TSS region transcription start site region 81517
Cpgi20406 8 69088503 to 69089414 911 CpG island CpG island 20406
Tssr77656 8 69088716 to 69088727 11 + TSS region transcription start site region 77656
Tssr77657 8 69088733 to 69088744 11 + TSS region transcription start site region 77657
Atp6v1b2 8 69088736 to 69113718 24982 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit B2
Tssr77658 8 69088753 to 69088796 43 + TSS region transcription start site region 77658
Tssr81518 8 69089200 to 69089215 15 - TSS region transcription start site region 81518
Tssr77659 8 69096234 to 69096248 14 + TSS region transcription start site region 77659
Tssr77660 8 69103644 to 69103703 59 + TSS region transcription start site region 77660
Tssr77661 8 69105900 to 69105926 26 + TSS region transcription start site region 77661
Tssr77662 8 69112451 to 69112497 46 + TSS region transcription start site region 77662
Tssr81519 8 69113697 to 69113715 18 - TSS region transcription start site region 81519
Tssr81520 8 69121409 to 69121422 13 - TSS region transcription start site region 81520
Cpgi20407 8 69121586 to 69121883 297 CpG island CpG island 20407
C230098O21Rik 8 69132668 to 69134710 2042 unclassified gene RIKEN cDNA C230098O21 gene
Lzts1 8 69132669 to 69184220 51551 - protein coding gene leucine zipper, putative tumor suppressor 1
Tssr81521 8 69134693 to 69134697 4 - TSS region transcription start site region 81521
Gm39187 8 69157186 to 69159724 2538 + lncRNA gene predicted gene, 39187
Tssr77663 8 69157777 to 69157801 24 + TSS region transcription start site region 77663
Cpgi20408 8 69183787 to 69184427 640 CpG island CpG island 20408
Tssr81522 8 69184177 to 69184240 63 - TSS region transcription start site region 81522
Tssr81523 8 69184249 to 69184257 8 - TSS region transcription start site region 81523
Gm39188 8 69206376 to 69208981 2605 - lncRNA gene predicted gene, 39188
Cpgi20409 8 69208839 to 69209279 440 CpG island CpG island 20409
Tssr77664 8 69209033 to 69209073 40 + TSS region transcription start site region 77664
Zfp930 8 69209046 to 69230539 21493 + protein coding gene zinc finger protein 930
Tssr77665 8 69209083 to 69209094 11 + TSS region transcription start site region 77665
Tssr77666 8 69209095 to 69209106 11 + TSS region transcription start site region 77666
Gm33178 8 69225536 to 69225792 256 - pseudogene predicted gene, 33178
Gm7684 8 69239202 to 69240030 828 - pseudogene predicted gene 7684
D130040H23Rik 8 69271053 to 69303384 32331 + protein coding gene RIKEN cDNA D130040H23 gene
Tssr77667 8 69271090 to 69271143 53 + TSS region transcription start site region 77667
Gm7688 8 69329218 to 69329554 336 + pseudogene predicted gene 7688
E230024E03Rik 8 69366509 to 69369565 3056 unclassified gene RIKEN cDNA E230024E03 gene
Gm10033 8 69371025 to 69395544 24519 - pseudogene predicted gene 10033
D8Mit130 8 69379377 to 69379526 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 130
Tssr81524 8 69387130 to 69387133 3 - TSS region transcription start site region 81524
Cpgi20410 8 69395299 to 69395609 310 CpG island CpG island 20410
Tssr81525 8 69395492 to 69395553 61 - TSS region transcription start site region 81525
Tssr81526 8 69395564 to 69395575 11 - TSS region transcription start site region 81526
Cpgi20411 8 69399403 to 69399824 421 CpG island CpG island 20411
Gm25661 8 69399725 to 69400020 295 + ribozyme gene predicted gene, 25661
Gm45848 8 69419497 to 69425233 5736 + lincRNA gene predicted gene 45848
Gm9495 8 69427980 to 69453565 25585 - protein coding gene predicted gene 9495
Tssr81527 8 69453537 to 69453582 45 - TSS region transcription start site region 81527
Gm45850 8 69470069 to 69470406 337 + pseudogene predicted gene 45850
Gm43263 8 69473492 to 69474842 1350 - lincRNA gene predicted gene 43263