Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:68904403-69894824

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165 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lpl 8 68880555 to 68906932 26377 + protein coding gene lipoprotein lipase
Tssr77632 8 68904499 to 68904514 15 + TSS region transcription start site region 77632
Tssr81504 8 68904550 to 68904580 30 - TSS region transcription start site region 81504
Tssr77633 8 68904616 to 68904636 20 + TSS region transcription start site region 77633
Tssr77634 8 68904691 to 68904710 19 + TSS region transcription start site region 77634
Tssr77635 8 68904832 to 68904854 22 + TSS region transcription start site region 77635
Tssr77636 8 68904866 to 68904880 14 + TSS region transcription start site region 77636
Tssr77637 8 68904881 to 68904902 21 + TSS region transcription start site region 77637
Tssr77638 8 68904983 to 68904998 15 + TSS region transcription start site region 77638
Tssr77639 8 68905064 to 68905139 75 + TSS region transcription start site region 77639
Tssr81505 8 68905126 to 68905154 28 - TSS region transcription start site region 81505
Tssr77640 8 68905140 to 68905162 22 + TSS region transcription start site region 77640
Tssr81506 8 68905683 to 68905696 13 - TSS region transcription start site region 81506
Tssr81507 8 68905718 to 68905731 13 - TSS region transcription start site region 81507
Tssr81508 8 68905732 to 68905746 14 - TSS region transcription start site region 81508
Tssr81509 8 68905761 to 68905783 22 - TSS region transcription start site region 81509
Tssr77641 8 68905811 to 68905829 18 + TSS region transcription start site region 77641
Tssr77642 8 68905836 to 68905847 11 + TSS region transcription start site region 77642
Tssr77643 8 68905971 to 68905978 7 + TSS region transcription start site region 77643
Tssr77644 8 68906023 to 68906034 11 + TSS region transcription start site region 77644
Tssr77645 8 68906076 to 68906087 11 + TSS region transcription start site region 77645
Tssr77646 8 68906089 to 68906100 11 + TSS region transcription start site region 77646
Tssr77647 8 68906146 to 68906157 11 + TSS region transcription start site region 77647
Tssr77648 8 68906188 to 68906197 9 + TSS region transcription start site region 77648
Tssr77649 8 68906203 to 68906210 7 + TSS region transcription start site region 77649
Tssr77650 8 68906324 to 68906331 7 + TSS region transcription start site region 77650
Tssr77651 8 68906358 to 68906366 8 + TSS region transcription start site region 77651
Tssr77652 8 68906459 to 68906470 11 + TSS region transcription start site region 77652
Tssr77653 8 68906500 to 68906509 9 + TSS region transcription start site region 77653
Tssr81510 8 68906923 to 68906935 12 - TSS region transcription start site region 81510
Gm45780 8 68950321 to 68950544 223 + pseudogene predicted gene 45780
Gm32997 8 68954003 to 68956183 2180 + lncRNA gene predicted gene, 32997
Gm33103 8 68971145 to 69001683 30538 - lincRNA gene predicted gene, 33103
Tssr81511 8 68993218 to 68993226 8 - TSS region transcription start site region 81511
Tssr77654 8 68993356 to 68993370 14 + TSS region transcription start site region 77654
Gm33052 8 68993387 to 68999665 6278 + lncRNA gene predicted gene, 33052
Tssr77655 8 69017635 to 69017672 37 + TSS region transcription start site region 77655
Tssr81512 8 69019841 to 69019852 11 - TSS region transcription start site region 81512
Tssr81513 8 69027650 to 69027693 43 - TSS region transcription start site region 81513
Slc18a1 8 69037711 to 69089235 51524 - protein coding gene solute carrier family 18 (vesicular monoamine), member 1
Gm15716 8 69044754 to 69063422 18668 + antisense lncRNA gene predicted gene 15716
Tssr81514 8 69077221 to 69077243 22 - TSS region transcription start site region 81514
Tssr81515 8 69077252 to 69077269 17 - TSS region transcription start site region 81515
Tssr81516 8 69077452 to 69077463 11 - TSS region transcription start site region 81516
Tssr81517 8 69084848 to 69084855 7 - TSS region transcription start site region 81517
Cpgi20406 8 69088503 to 69089414 911 CpG island CpG island 20406
Tssr77656 8 69088716 to 69088727 11 + TSS region transcription start site region 77656
Tssr77657 8 69088733 to 69088744 11 + TSS region transcription start site region 77657
Atp6v1b2 8 69088736 to 69113718 24982 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit B2
Tssr77658 8 69088753 to 69088796 43 + TSS region transcription start site region 77658
Tssr81518 8 69089200 to 69089215 15 - TSS region transcription start site region 81518
Tssr77659 8 69096234 to 69096248 14 + TSS region transcription start site region 77659
Tssr77660 8 69103644 to 69103703 59 + TSS region transcription start site region 77660
Tssr77661 8 69105900 to 69105926 26 + TSS region transcription start site region 77661
Tssr77662 8 69112451 to 69112497 46 + TSS region transcription start site region 77662
Tssr81519 8 69113697 to 69113715 18 - TSS region transcription start site region 81519
Tssr81520 8 69121409 to 69121422 13 - TSS region transcription start site region 81520
Cpgi20407 8 69121586 to 69121883 297 CpG island CpG island 20407
C230098O21Rik 8 69132668 to 69134710 2042 unclassified gene RIKEN cDNA C230098O21 gene
Lzts1 8 69132669 to 69184220 51551 - protein coding gene leucine zipper, putative tumor suppressor 1
Tssr81521 8 69134693 to 69134697 4 - TSS region transcription start site region 81521
Gm39187 8 69157186 to 69159724 2538 + lncRNA gene predicted gene, 39187
Tssr77663 8 69157777 to 69157801 24 + TSS region transcription start site region 77663
Cpgi20408 8 69183787 to 69184427 640 CpG island CpG island 20408
Tssr81522 8 69184177 to 69184240 63 - TSS region transcription start site region 81522
Tssr81523 8 69184249 to 69184257 8 - TSS region transcription start site region 81523
Gm39188 8 69206376 to 69208981 2605 - lncRNA gene predicted gene, 39188
Cpgi20409 8 69208839 to 69209279 440 CpG island CpG island 20409
Tssr77664 8 69209033 to 69209073 40 + TSS region transcription start site region 77664
Zfp930 8 69209046 to 69230539 21493 + protein coding gene zinc finger protein 930
Tssr77665 8 69209083 to 69209094 11 + TSS region transcription start site region 77665
Tssr77666 8 69209095 to 69209106 11 + TSS region transcription start site region 77666
Gm33178 8 69225536 to 69225792 256 - pseudogene predicted gene, 33178
Gm7684 8 69239202 to 69240030 828 - pseudogene predicted gene 7684
D130040H23Rik 8 69271053 to 69303384 32331 + protein coding gene RIKEN cDNA D130040H23 gene
Tssr77667 8 69271090 to 69271143 53 + TSS region transcription start site region 77667
Gm7688 8 69329218 to 69329554 336 + pseudogene predicted gene 7688
E230024E03Rik 8 69366509 to 69369565 3056 unclassified gene RIKEN cDNA E230024E03 gene
Gm10033 8 69371025 to 69395544 24519 - pseudogene predicted gene 10033
D8Mit130 8 69379377 to 69379526 149 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 130
Tssr81524 8 69387130 to 69387133 3 - TSS region transcription start site region 81524
Cpgi20410 8 69395299 to 69395609 310 CpG island CpG island 20410
Tssr81525 8 69395492 to 69395553 61 - TSS region transcription start site region 81525
Tssr81526 8 69395564 to 69395575 11 - TSS region transcription start site region 81526
Cpgi20411 8 69399403 to 69399824 421 CpG island CpG island 20411
Gm25661 8 69399725 to 69400020 295 + ribozyme gene predicted gene, 25661
Gm45848 8 69419497 to 69425233 5736 + lincRNA gene predicted gene 45848
Gm9495 8 69427980 to 69453565 25585 - protein coding gene predicted gene 9495
Tssr81527 8 69453537 to 69453582 45 - TSS region transcription start site region 81527
Gm45850 8 69470069 to 69470406 337 + pseudogene predicted gene 45850
Gm43263 8 69473492 to 69474842 1350 - lincRNA gene predicted gene 43263
Gm7697 8 69482621 to 69522925 40304 - protein coding gene predicted gene 7697
Tssr81528 8 69522957 to 69522994 37 - TSS region transcription start site region 81528
Rps7-ps1 8 69540957 to 69541347 390 + pseudogene ribosomal protein S7, pseudogene 1
Gm3365 8 69554777 to 69576208 21431 - pseudogene predicted gene 3365
Cpgi20412 8 69584673 to 69585182 509 CpG island CpG island 20412
Zfp868 8 69610857 to 69625548 14691 - protein coding gene zinc finger protein 868
Cpgi20413 8 69625060 to 69625733 673 CpG island CpG island 20413
Tssr81529 8 69625146 to 69625193 47 - TSS region transcription start site region 81529
Tssr81530 8 69625503 to 69625559 56 - TSS region transcription start site region 81530
Cpgi20414 8 69654323 to 69655145 822 CpG island CpG island 20414
Zfp964 8 69654479 to 69666982 12503 + protein coding gene zinc finger protein 964
Tssr77668 8 69654482 to 69654497 15 + TSS region transcription start site region 77668
Zfp869 8 69706332 to 69710724 4392 - protein coding gene zinc finger protein 869
Cpgi20415 8 69716378 to 69717152 774 CpG island CpG island 20415
Tssr81531 8 69716415 to 69716424 9 - TSS region transcription start site region 81531
Tssr81532 8 69716437 to 69716492 55 - TSS region transcription start site region 81532
Tssr77669 8 69716580 to 69716589 9 + TSS region transcription start site region 77669
Tssr81533 8 69716827 to 69716843 16 - TSS region transcription start site region 81533
Tssr81534 8 69716850 to 69716912 62 - TSS region transcription start site region 81534
Zfp963 8 69741639 to 69749962 8323 - protein coding gene zinc finger protein 963
Gm20422 8 69742862 to 69774886 32024 - protein coding gene predicted gene 20422
Cpgi20416 8 69749523 to 69750151 628 CpG island CpG island 20416
1700093C20Rik 8 69749692 to 69750625 933 unclassified gene RIKEN cDNA 1700093C20 gene
Tssr81535 8 69749938 to 69749970 32 - TSS region transcription start site region 81535
Tssr2593 8 69749979 to 69749990 11 - TSS region transcription start site region 2593
Gm19893 8 69755790 to 69756396 606 + pseudogene predicted gene, 19893
Zfp866 8 69761324 to 69774911 13587 - protein coding gene zinc finger protein 866
Cpgi20417 8 69774525 to 69775036 511 CpG island CpG island 20417
Tssr81536 8 69774884 to 69774916 32 - TSS region transcription start site region 81536
Gm39189 8 69787010 to 69791199 4189 - lncRNA gene predicted gene, 39189
Cpgi20418 8 69790845 to 69791907 1062 CpG island CpG island 20418
Atp13a1 8 69791163 to 69807749 16586 + protein coding gene ATPase type 13A1
Tssr81537 8 69791170 to 69791212 42 - TSS region transcription start site region 81537
Tssr77670 8 69791221 to 69791257 36 + TSS region transcription start site region 77670
Tssr77671 8 69797787 to 69797808 21 + TSS region transcription start site region 77671
Cpgi20419 8 69808525 to 69809394 869 CpG island CpG island 20419
Tssr77672 8 69808672 to 69808742 70 + TSS region transcription start site region 77672
Gmip 8 69808679 to 69821870 13191 + protein coding gene Gem-interacting protein
Tssr77673 8 69811659 to 69811672 13 + TSS region transcription start site region 77673
Tssr77674 8 69811894 to 69811908 14 + TSS region transcription start site region 77674
Tssr77675 8 69812337 to 69812353 16 + TSS region transcription start site region 77675
Tssr77676 8 69812398 to 69812415 17 + TSS region transcription start site region 77676
Tssr77677 8 69812649 to 69812664 15 + TSS region transcription start site region 77677
Gm33695 8 69813310 to 69814081 771 - lncRNA gene predicted gene, 33695
Tssr77678 8 69816798 to 69816831 33 + TSS region transcription start site region 77678
Cpgi20420 8 69822053 to 69822260 207 CpG island CpG island 20420
Tssr77679 8 69822154 to 69822165 11 + TSS region transcription start site region 77679
Cpgi20421 8 69822530 to 69822827 297 CpG island CpG island 20421
Tssr77680 8 69822562 to 69822592 30 + TSS region transcription start site region 77680
Lpar2 8 69822565 to 69831102 8537 + protein coding gene lysophosphatidic acid receptor 2
Tssr77681 8 69822597 to 69822635 38 + TSS region transcription start site region 77681
Tssr77682 8 69822646 to 69822657 11 + TSS region transcription start site region 77682
Cpgi20422 8 69832392 to 69832983 591 CpG island CpG island 20422
Tssr77683 8 69832485 to 69832535 50 + TSS region transcription start site region 77683
Pbx4 8 69832491 to 69872292 39801 + protein coding gene pre B cell leukemia homeobox 4
Tssr77684 8 69832633 to 69832712 79 + TSS region transcription start site region 77684
Tssr77685 8 69832745 to 69832754 9 + TSS region transcription start site region 77685
Tssr77686 8 69832762 to 69832781 19 + TSS region transcription start site region 77686
Tssr77687 8 69832798 to 69832809 11 + TSS region transcription start site region 77687
Tssr77688 8 69849321 to 69849341 20 + TSS region transcription start site region 77688
Cilp2 8 69880366 to 69887392 7026 - protein coding gene cartilage intermediate layer protein 2
Cpgi20423 8 69880727 to 69883505 2778 CpG island CpG island 20423
Tssr81538 8 69882162 to 69882176 14 - TSS region transcription start site region 81538
Gm33746 8 69882980 to 69888384 5404 + lncRNA gene predicted gene, 33746
Cpgi20424 8 69885368 to 69885558 190 CpG island CpG island 20424
Cpgi20425 8 69885811 to 69886738 927 CpG island CpG island 20425
Cpgi20426 8 69887098 to 69888327 1229 CpG island CpG island 20426
Tssr81539 8 69887381 to 69887401 20 - TSS region transcription start site region 81539
Yjefn3 8 69887788 to 69902712 14924 - protein coding gene YjeF N-terminal domain containing 3
Tssr81540 8 69888201 to 69888215 14 - TSS region transcription start site region 81540
Tssr81541 8 69888230 to 69888237 7 - TSS region transcription start site region 81541
Cpgi20427 8 69888601 to 69889700 1099 CpG island CpG island 20427
Tssr81542 8 69893979 to 69893984 5 - TSS region transcription start site region 81542
Ndufa13 8 69894180 to 69902558 8378 - protein coding gene NADH:ubiquinone oxidoreductase subunit A13