Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:68340138-68900437

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh2d4a 8 68276567 to 68347699 71132 + protein coding gene SH2 domain containing 4A
Csgalnact1 8 68356781 to 68735146 378365 - protein coding gene chondroitin sulfate N-acetylgalactosaminyltransferase 1
1700125H03Rik 8 68368459 to 68375710 7251 + antisense lncRNA gene RIKEN cDNA 1700125H03 gene
Tssr77598 8 68368461 to 68368469 8 + TSS region transcription start site region 77598
Gm15656 8 68457148 to 68458681 1533 + antisense lncRNA gene predicted gene 15656
Cpgi20402 8 68461116 to 68461446 330 CpG island CpG island 20402
Tssr2591 8 68533380 to 68533386 6 - TSS region transcription start site region 2591
9530019H20Rik 8 68536034 to 68540260 4226 unclassified non-coding RNA gene RIKEN cDNA 9530019H20 gene
Tssr81495 8 68557017 to 68557052 35 - TSS region transcription start site region 81495
Gm15654 8 68620138 to 68620437 299 + pseudogene predicted gene 15654
A130009I22Rik 8 68627264 to 68630144 2880 unclassified gene RIKEN cDNA A130009I22 gene
Tssr77599 8 68636242 to 68636246 4 + TSS region transcription start site region 77599
Cpgi20403 8 68734454 to 68735490 1036 CpG island CpG island 20403
Tssr81496 8 68735058 to 68735147 89 - TSS region transcription start site region 81496
Tssr2592 8 68772443 to 68772468 25 + TSS region transcription start site region 2592
Cpgi20404 8 68793530 to 68794584 1054 CpG island CpG island 20404
Ints10 8 68793928 to 68829410 35482 + protein coding gene integrator complex subunit 10
Tssr77600 8 68793940 to 68794016 76 + TSS region transcription start site region 77600
Gm15549 8 68798867 to 68799488 621 + pseudogene predicted gene 15549
Tssr81497 8 68852595 to 68852604 9 - TSS region transcription start site region 81497
D8Mit26 8 68879344 to 68879515 171 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 26
Cpgi20405 8 68880413 to 68881624 1211 CpG island CpG island 20405
Tssr77601 8 68880548 to 68880564 16 + TSS region transcription start site region 77601
Lpl 8 68880555 to 68906932 26377 + protein coding gene lipoprotein lipase
Tssr77602 8 68880631 to 68880642 11 + TSS region transcription start site region 77602
Tssr77603 8 68880650 to 68880672 22 + TSS region transcription start site region 77603
Tssr77604 8 68880714 to 68880717 3 + TSS region transcription start site region 77604
Tssr77605 8 68880723 to 68880730 7 + TSS region transcription start site region 77605
Tssr77606 8 68884347 to 68884350 3 + TSS region transcription start site region 77606
Tssr77607 8 68884413 to 68884424 11 + TSS region transcription start site region 77607
Tssr77608 8 68884434 to 68884451 17 + TSS region transcription start site region 77608
Tssr77609 8 68884469 to 68884493 24 + TSS region transcription start site region 77609
Tssr77610 8 68884540 to 68884561 21 + TSS region transcription start site region 77610
Tssr77611 8 68886916 to 68886926 10 + TSS region transcription start site region 77611
Tssr77612 8 68886941 to 68886963 22 + TSS region transcription start site region 77612
Tssr81498 8 68887487 to 68887525 38 - TSS region transcription start site region 81498
Tssr77613 8 68892589 to 68892726 137 + TSS region transcription start site region 77613
Tssr81499 8 68892684 to 68892712 28 - TSS region transcription start site region 81499
Tssr77614 8 68894618 to 68894716 98 + TSS region transcription start site region 77614
Tssr81500 8 68894666 to 68894693 27 - TSS region transcription start site region 81500
Tssr77615 8 68895659 to 68895726 67 + TSS region transcription start site region 77615
Tssr77616 8 68895757 to 68895770 13 + TSS region transcription start site region 77616
Tssr77617 8 68895797 to 68895843 46 + TSS region transcription start site region 77617
Tssr77618 8 68895844 to 68895853 9 + TSS region transcription start site region 77618
Tssr77619 8 68896588 to 68896606 18 + TSS region transcription start site region 77619
Tssr77620 8 68896607 to 68896651 44 + TSS region transcription start site region 77620
Tssr81501 8 68896663 to 68896725 62 - TSS region transcription start site region 81501
Tssr77621 8 68896685 to 68896688 3 + TSS region transcription start site region 77621
Tssr77622 8 68896690 to 68896701 11 + TSS region transcription start site region 77622
Tssr77623 8 68896733 to 68896741 8 + TSS region transcription start site region 77623
Tssr77624 8 68896757 to 68896774 17 + TSS region transcription start site region 77624
Tssr77625 8 68896779 to 68896791 12 + TSS region transcription start site region 77625
Tssr77626 8 68896794 to 68896804 10 + TSS region transcription start site region 77626
Tssr77627 8 68899475 to 68899521 46 + TSS region transcription start site region 77627