Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:67661061-68751083

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr77589 8 67685467 to 67685483 16 + TSS region transcription start site region 77589
Tssr77590 8 67685509 to 67685526 17 + TSS region transcription start site region 77590
Psd3 8 67689082 to 68206057 516975 - protein coding gene pleckstrin and Sec7 domain containing 3
Tssr81462 8 67693513 to 67693516 3 - TSS region transcription start site region 81462
Tssr2589 8 67696042 to 67696060 18 - TSS region transcription start site region 2589
D8Mit340 8 67740709 to 67740824 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 340
Tssr81463 8 67818218 to 67818269 51 - TSS region transcription start site region 81463
Tssr81464 8 67818284 to 67818320 36 - TSS region transcription start site region 81464
Tssr81465 8 67833874 to 67833877 3 - TSS region transcription start site region 81465
Tssr81466 8 67862069 to 67862073 4 - TSS region transcription start site region 81466
Gm32888 8 67862928 to 67863826 898 - lncRNA gene predicted gene, 32888
Tssr81467 8 67910911 to 67910935 24 - TSS region transcription start site region 81467
Tssr81468 8 67920961 to 67920974 13 - TSS region transcription start site region 81468
Tssr81469 8 67920997 to 67921012 15 - TSS region transcription start site region 81469
Tssr81470 8 67950339 to 67950388 49 - TSS region transcription start site region 81470
Tssr77591 8 67956545 to 67956558 13 + TSS region transcription start site region 77591
Tssr77592 8 67956754 to 67956788 34 + TSS region transcription start site region 77592
Gm15991 8 67956769 to 67978051 21282 + antisense lncRNA gene predicted gene 15991
Tssr81471 8 67974539 to 67974548 9 - TSS region transcription start site region 81471
Tssr81472 8 67974567 to 67974596 29 - TSS region transcription start site region 81472
Tssr77593 8 68009084 to 68009088 4 + TSS region transcription start site region 77593
Gm22018 8 68010340 to 68010470 130 + snoRNA gene predicted gene, 22018
Tssr81473 8 68042687 to 68042702 15 - TSS region transcription start site region 81473
Tssr81474 8 68061373 to 68061376 3 - TSS region transcription start site region 81474
Cpgi20399 8 68061823 to 68063100 1277 CpG island CpG island 20399
Tssr81475 8 68062246 to 68062344 98 - TSS region transcription start site region 81475
Tssr81476 8 68062444 to 68062504 60 - TSS region transcription start site region 81476
Tssr81477 8 68121052 to 68121074 22 - TSS region transcription start site region 81477
Tssr81478 8 68121320 to 68121369 49 - TSS region transcription start site region 81478
Tssr81479 8 68121620 to 68121637 17 - TSS region transcription start site region 81479
D8Mit29 8 68123250 to 68123357 107 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 29
Q 8 68123250 to 94173804 26050554 heritable phenotypic marker quinky
Tssr2590 8 68157563 to 68157566 3 + TSS region transcription start site region 2590
Tssr81480 8 68158489 to 68158516 27 - TSS region transcription start site region 81480
Tssr81481 8 68204915 to 68204919 4 - TSS region transcription start site region 81481
Tssr81482 8 68205742 to 68205748 6 - TSS region transcription start site region 81482
Tssr81483 8 68206012 to 68206026 14 - TSS region transcription start site region 81483
Tssr81484 8 68206043 to 68206060 17 - TSS region transcription start site region 81484
Tssr81485 8 68206061 to 68206083 22 - TSS region transcription start site region 81485
Cpgi20400 8 68206835 to 68207004 169 CpG island CpG island 20400
Tssr81486 8 68212007 to 68212016 9 - TSS region transcription start site region 81486
Tssr81487 8 68212029 to 68212050 21 - TSS region transcription start site region 81487
Tssr81488 8 68212054 to 68212065 11 - TSS region transcription start site region 81488
Tssr81489 8 68212071 to 68212088 17 - TSS region transcription start site region 81489
Tssr81490 8 68212098 to 68212115 17 - TSS region transcription start site region 81490
Tssr81491 8 68212120 to 68212136 16 - TSS region transcription start site region 81491
Tssr81492 8 68212192 to 68212204 12 - TSS region transcription start site region 81492
Tssr81493 8 68212228 to 68212240 12 - TSS region transcription start site region 81493
Tssr81494 8 68212254 to 68212266 12 - TSS region transcription start site region 81494
Gm26659 8 68218173 to 68228413 10240 - lincRNA gene predicted gene, 26659
D8Mit73 8 68269827 to 68270001 174 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 73
Char12 8 68269827 to 82600347 14330520 QTL P. chabaudi malaria resistance QTL 12
Cpgi20401 8 68276565 to 68277564 999 CpG island CpG island 20401
Sh2d4a 8 68276567 to 68347699 71132 + protein coding gene SH2 domain containing 4A
Tssr77594 8 68276691 to 68276705 14 + TSS region transcription start site region 77594
Tssr77595 8 68276713 to 68276752 39 + TSS region transcription start site region 77595
Tssr77596 8 68276803 to 68276815 12 + TSS region transcription start site region 77596
Gm45739 8 68299069 to 68299456 387 + pseudogene predicted gene 45739
Gm19170 8 68316997 to 68318080 1083 - pseudogene predicted gene, 19170
Tssr77597 8 68317711 to 68317717 6 + TSS region transcription start site region 77597
Csgalnact1 8 68356781 to 68735146 378365 - protein coding gene chondroitin sulfate N-acetylgalactosaminyltransferase 1
1700125H03Rik 8 68368459 to 68375710 7251 + antisense lncRNA gene RIKEN cDNA 1700125H03 gene
Tssr77598 8 68368461 to 68368469 8 + TSS region transcription start site region 77598
Gm15656 8 68457148 to 68458681 1533 + antisense lncRNA gene predicted gene 15656
Cpgi20402 8 68461116 to 68461446 330 CpG island CpG island 20402
Tssr2591 8 68533380 to 68533386 6 - TSS region transcription start site region 2591
9530019H20Rik 8 68536034 to 68540260 4226 unclassified non-coding RNA gene RIKEN cDNA 9530019H20 gene
Tssr81495 8 68557017 to 68557052 35 - TSS region transcription start site region 81495
Gm15654 8 68620138 to 68620437 299 + pseudogene predicted gene 15654
A130009I22Rik 8 68627264 to 68630144 2880 unclassified gene RIKEN cDNA A130009I22 gene
Tssr77599 8 68636242 to 68636246 4 + TSS region transcription start site region 77599
Cpgi20403 8 68734454 to 68735490 1036 CpG island CpG island 20403
Tssr81496 8 68735058 to 68735147 89 - TSS region transcription start site region 81496