Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:66880554-68150594

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Naf1 8 66860217 to 66890564 30347 + protein coding gene nuclear assembly factor 1 ribonucleoprotein
Tssr77586 8 66889235 to 66889248 13 + TSS region transcription start site region 77586
Gm39185 8 66905997 to 66937826 31829 + lincRNA gene predicted gene, 39185
Gm25275 8 66918650 to 66918778 128 - snoRNA gene predicted gene, 25275
Tssr81460 8 66971949 to 66971950 1 - TSS region transcription start site region 81460
Tssr2588 8 67050751 to 67050757 6 + TSS region transcription start site region 2588
Gm7639 8 67053650 to 67054133 483 - pseudogene predicted gene 7639
Gm45827 8 67176771 to 67177787 1016 + lincRNA gene predicted gene 45827
Gm32623 8 67198946 to 67235307 36361 - lncRNA gene predicted gene, 32623
Gm24274 8 67213296 to 67213419 123 - snRNA gene predicted gene, 24274
Gm24677 8 67279082 to 67279231 149 - snoRNA gene predicted gene, 24677
Gm45880 8 67310687 to 67311539 852 + pseudogene predicted gene 45880
Tssr77587 8 67333256 to 67333260 4 + TSS region transcription start site region 77587
Gm10660 8 67352104 to 67365004 12900 - lincRNA gene predicted gene 10660
Nat1 8 67485171 to 67492582 7411 + protein coding gene N-acetyl transferase 1
D8Srb1 8 67493936 to 67494113 177 DNA segment DNA sement, Chr 8, Sotiria R. Boukouvala 1
Tssr77588 8 67494843 to 67494883 40 + TSS region transcription start site region 77588
Nat2 8 67494858 to 67502584 7726 + protein coding gene N-acetyltransferase 2 (arylamine N-acetyltransferase)
D8Mit71 8 67496627 to 67496764 137 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 71
D8Srb2 8 67496644 to 67496796 152 DNA segment DNA sement, Chr 8, Sotiria R. Boukouvala 2
D8Srb3 8 67498724 to 67498900 176 DNA segment DNA sement, Chr 8, Sotiria R. Boukouvala 3
D8Srb4 8 67503029 to 67503237 208 DNA segment DNA sement, Chr 8, Sotiria R. Boukouvala 4
Gm9755 8 67514235 to 67515590 1355 - pseudogene predicted pseudogene 9755
Tssr81461 8 67515554 to 67515594 40 - TSS region transcription start site region 81461
Nat3 8 67523854 to 67548627 24773 + protein coding gene N-acetyltransferase 3
Gm36247 8 67584906 to 67585190 284 - pseudogene predicted gene, 36247
Gm44391 8 67629014 to 67629106 92 - miRNA gene predicted gene, 44391
Tssr77589 8 67685467 to 67685483 16 + TSS region transcription start site region 77589
Tssr77590 8 67685509 to 67685526 17 + TSS region transcription start site region 77590
Psd3 8 67689082 to 68206057 516975 - protein coding gene pleckstrin and Sec7 domain containing 3
Tssr81462 8 67693513 to 67693516 3 - TSS region transcription start site region 81462
Tssr2589 8 67696042 to 67696060 18 - TSS region transcription start site region 2589
D8Mit340 8 67740709 to 67740824 115 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 340
Tssr81463 8 67818218 to 67818269 51 - TSS region transcription start site region 81463
Tssr81464 8 67818284 to 67818320 36 - TSS region transcription start site region 81464
Tssr81465 8 67833874 to 67833877 3 - TSS region transcription start site region 81465
Tssr81466 8 67862069 to 67862073 4 - TSS region transcription start site region 81466
Gm32888 8 67862928 to 67863826 898 - lncRNA gene predicted gene, 32888
Tssr81467 8 67910911 to 67910935 24 - TSS region transcription start site region 81467
Tssr81468 8 67920961 to 67920974 13 - TSS region transcription start site region 81468
Tssr81469 8 67920997 to 67921012 15 - TSS region transcription start site region 81469
Tssr81470 8 67950339 to 67950388 49 - TSS region transcription start site region 81470
Tssr77591 8 67956545 to 67956558 13 + TSS region transcription start site region 77591
Tssr77592 8 67956754 to 67956788 34 + TSS region transcription start site region 77592
Gm15991 8 67956769 to 67978051 21282 + antisense lncRNA gene predicted gene 15991
Tssr81471 8 67974539 to 67974548 9 - TSS region transcription start site region 81471
Tssr81472 8 67974567 to 67974596 29 - TSS region transcription start site region 81472
Tssr77593 8 68009084 to 68009088 4 + TSS region transcription start site region 77593
Gm22018 8 68010340 to 68010470 130 + snoRNA gene predicted gene, 22018
Tssr81473 8 68042687 to 68042702 15 - TSS region transcription start site region 81473
Tssr81474 8 68061373 to 68061376 3 - TSS region transcription start site region 81474
Cpgi20399 8 68061823 to 68063100 1277 CpG island CpG island 20399
Tssr81475 8 68062246 to 68062344 98 - TSS region transcription start site region 81475
Tssr81476 8 68062444 to 68062504 60 - TSS region transcription start site region 81476
Tssr81477 8 68121052 to 68121074 22 - TSS region transcription start site region 81477
Tssr81478 8 68121320 to 68121369 49 - TSS region transcription start site region 81478
Tssr81479 8 68121620 to 68121637 17 - TSS region transcription start site region 81479
D8Mit29 8 68123250 to 68123357 107 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 29
Q 8 68123250 to 94173804 26050554 heritable phenotypic marker quinky