MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:66471611-66552383

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
March1	8	65617922 to 66471637	853715	+	protein coding gene	membrane-associated ring finger (C3HC4) 1
Tssr77572	8	66471880 to 66471924	44	+	TSS region	transcription start site region 77572
Tssr77573	8	66472426 to 66472432	6	+	TSS region	transcription start site region 77573
Tma16	8	66473118 to 66486530	13412	-	protein coding gene	translation machinery associated 16
Tssr81453	8	66480383 to 66480417	34	-	TSS region	transcription start site region 81453
Tssr81454	8	66481336 to 66481341	5	-	TSS region	transcription start site region 81454
Tssr81455	8	66484015 to 66484025	10	-	TSS region	transcription start site region 81455
Cpgi20394	8	66486058 to 66486718	660		CpG island	CpG island 20394
Tssr81456	8	66486452 to 66486469	17	-	TSS region	transcription start site region 81456
Tssr81457	8	66486494 to 66486539	45	-	TSS region	transcription start site region 81457
Tssr81458	8	66486540 to 66486551	11	-	TSS region	transcription start site region 81458
Tssr81459	8	66490740 to 66490779	39	-	TSS region	transcription start site region 81459
Tssr77574	8	66491007 to 66491028	21	+	TSS region	transcription start site region 77574
Gm32568	8	66495059 to 66496946	1887	+	lincRNA gene	predicted gene, 32568
Cpgi20395	8	66511611 to 66512383	772		CpG island	CpG island 20395
Tssr77575	8	66511732 to 66511743	11	+	TSS region	transcription start site region 77575
Tssr77576	8	66511751 to 66511764	13	+	TSS region	transcription start site region 77576
Tktl2	8	66511756 to 66518335	6579	+	protein coding gene	transketolase-like 2