Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:64979862-66299866

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trim75 8 64981651 to 64987644 5993 - protein coding gene tripartite motif-containing 75
Cpgi20392 8 64983621 to 64983789 168 CpG island CpG island 20392
Trim60 8 64999307 to 65018584 19277 - protein coding gene tripartite motif-containing 60
Trim61 8 65012987 to 65018523 5536 - protein coding gene tripartite motif-containing 61
Gm45886 8 65014856 to 65037096 22240 - unclassified non-coding RNA gene predicted gene 45886
Gm45448 8 65015592 to 65015800 208 + pseudogene predicted gene 45448
Tssr81436 8 65018579 to 65018588 9 - TSS region transcription start site region 81436
Apela 8 65028417 to 65037336 8919 - protein coding gene apelin receptor early endogenous ligand
Tssr81437 8 65037102 to 65037132 30 - TSS region transcription start site region 81437
Tssr81438 8 65037139 to 65037171 32 - TSS region transcription start site region 81438
Tssr81439 8 65037176 to 65037191 15 - TSS region transcription start site region 81439
Gm39183 8 65040966 to 65079475 38509 + lncRNA gene predicted gene, 39183
Gm10663 8 65075033 to 65077480 2447 + protein coding gene predicted gene 10663
Smim31 8 65085613 to 65129537 43924 - protein coding gene small integral membrane protein 31
Gm45445 8 65092315 to 65092546 231 - pseudogene predicted gene 45445
Gm48810 8 65093590 to 65094043 453 - pseudogene predicted gene, 48810
Gm24333 8 65093831 to 65093914 83 - miRNA gene predicted gene, 24333
Tssr81440 8 65097737 to 65097740 3 - TSS region transcription start site region 81440
Tssr81441 8 65101085 to 65101098 13 - TSS region transcription start site region 81441
Gm39184 8 65104115 to 65109866 5751 + lncRNA gene predicted gene, 39184
Cpgi20393 8 65107974 to 65108230 256 CpG island CpG island 20393
Tssr81442 8 65129317 to 65129328 11 - TSS region transcription start site region 81442
Tssr81443 8 65129334 to 65129343 9 - TSS region transcription start site region 81443
Tssr81444 8 65129374 to 65129383 9 - TSS region transcription start site region 81444
Tssr81445 8 65129409 to 65129424 15 - TSS region transcription start site region 81445
Tssr81446 8 65129445 to 65129463 18 - TSS region transcription start site region 81446
Tssr81447 8 65129465 to 65129482 17 - TSS region transcription start site region 81447
Tssr81448 8 65129524 to 65129540 16 - TSS region transcription start site region 81448
Tssr81449 8 65129554 to 65129572 18 - TSS region transcription start site region 81449
Tssr81450 8 65129581 to 65129599 18 - TSS region transcription start site region 81450
Tssr81451 8 65129613 to 65129620 7 - TSS region transcription start site region 81451
Gm7619 8 65131033 to 65132314 1281 - pseudogene predicted gene 7619
Tssr81452 8 65132398 to 65132411 13 - TSS region transcription start site region 81452
Gm45249 8 65184244 to 65184591 347 + pseudogene predicted gene 45249
Tssr77539 8 65209105 to 65209115 10 + TSS region transcription start site region 77539
Tssr77540 8 65209116 to 65209134 18 + TSS region transcription start site region 77540
Tssr77541 8 65209135 to 65209161 26 + TSS region transcription start site region 77541
Tssr77542 8 65209165 to 65209185 20 + TSS region transcription start site region 77542
Tssr77543 8 65209194 to 65209206 12 + TSS region transcription start site region 77543
Gm7624 8 65278753 to 65279187 434 - pseudogene predicted gene 7624
Vaultrc-ps1 8 65367300 to 65367442 142 + pseudogene vault RNA component pseudogene 1
Gm25403 8 65367301 to 65367443 142 + unclassified non-coding RNA gene predicted gene, 25403
D8Mit30 8 65426351 to 65426511 160 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 30
March1 8 65617922 to 66471637 853715 + protein coding gene membrane-associated ring finger (C3HC4) 1
Tssr77544 8 65618029 to 65618091 62 + TSS region transcription start site region 77544
Tssr77545 8 65639360 to 65639371 11 + TSS region transcription start site region 77545
Tssr77546 8 65639862 to 65639866 4 + TSS region transcription start site region 77546
Gm23515 8 65667595 to 65667701 106 - snRNA gene predicted gene, 23515
Alaa3 8 65792939 to 65793021 82 QTL alopecia areata 3
D8Mit132 8 65792939 to 65793021 82 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 132
Gm15355 8 65817311 to 65817595 284 - pseudogene predicted gene 15355
Tssr77547 8 65820594 to 65820599 5 + TSS region transcription start site region 77547
Gm26123 8 65902057 to 65902191 134 + snoRNA gene predicted gene, 26123
D8Mit131 8 65958678 to 65958804 126 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 131
D8Dcr27 8 65958700 to 65958804 104 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 27
Tssr77548 8 65966638 to 65966645 7 + TSS region transcription start site region 77548
Tssr77549 8 65966659 to 65966664 5 + TSS region transcription start site region 77549
Tssr77550 8 65966677 to 65966695 18 + TSS region transcription start site region 77550
Tssr77551 8 65967166 to 65967191 25 + TSS region transcription start site region 77551
Gm24205 8 66002346 to 66002452 106 - snRNA gene predicted gene, 24205
B230308H17Rik 8 66139015 to 66140711 1696 unclassified gene RIKEN cDNA B230308H17 gene