Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:64439862-66839866

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172 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr77535 8 64445607 to 64445621 14 + TSS region transcription start site region 77535
D8Mit261 8 64498733 to 64498905 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 261
Mir710 8 64514332 to 64514441 109 - miRNA gene microRNA 710
Tssr77536 8 64543849 to 64543854 5 + TSS region transcription start site region 77536
Cpe 8 64592542 to 64693054 100512 - protein coding gene carboxypeptidase E
Tssr81412 8 64592871 to 64592899 28 - TSS region transcription start site region 81412
Tssr81413 8 64609103 to 64609113 10 - TSS region transcription start site region 81413
Tssr81414 8 64609124 to 64609139 15 - TSS region transcription start site region 81414
Tssr81415 8 64617639 to 64617650 11 - TSS region transcription start site region 81415
Tssr81416 8 64617652 to 64617663 11 - TSS region transcription start site region 81416
Tssr81417 8 64619483 to 64619508 25 - TSS region transcription start site region 81417
Tssr77537 8 64619490 to 64619510 20 + TSS region transcription start site region 77537
Tssr81418 8 64620491 to 64620499 8 - TSS region transcription start site region 81418
D8Mit25 8 64637030 to 64637146 116 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 25
Char11 8 64637030 to 64637146 116 QTL P. chabaudi malaria resistance QTL 11
Adip4 8 64637030 to 64637146 116 QTL adiposity 4
9330197I21Rik 8 64654526 to 64659524 4998 unclassified gene RIKEN cDNA 9330197I21 gene
Tssr81419 8 64689477 to 64689488 11 - TSS region transcription start site region 81419
Tssr81420 8 64692449 to 64692454 5 - TSS region transcription start site region 81420
Cpgi20388 8 64692486 to 64693314 828 CpG island CpG island 20388
Tssr81421 8 64692948 to 64692979 31 - TSS region transcription start site region 81421
Tssr81422 8 64692980 to 64692994 14 - TSS region transcription start site region 81422
Tssr81423 8 64692995 to 64693021 26 - TSS region transcription start site region 81423
Tssr81424 8 64693027 to 64693038 11 - TSS region transcription start site region 81424
Tssr81425 8 64693045 to 64693074 29 - TSS region transcription start site region 81425
Gm45518 8 64701107 to 64711076 9969 - lincRNA gene predicted gene 45518
Msmo1 8 64718145 to 64733578 15433 - protein coding gene methylsterol monoxygenase 1
Tssr81426 8 64718670 to 64718691 21 - TSS region transcription start site region 81426
Tssr81427 8 64718966 to 64719001 35 - TSS region transcription start site region 81427
Cpgi20389 8 64733156 to 64733993 837 CpG island CpG island 20389
Tssr81428 8 64733534 to 64733554 20 - TSS region transcription start site region 81428
Tssr81429 8 64733570 to 64733584 14 - TSS region transcription start site region 81429
Skull11 8 64737134 to 64737254 120 QTL skull morphology 11
D8Mit8 8 64737134 to 64737254 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 8
Klhl2 8 64739675 to 64850017 110342 - protein coding gene kelch-like 2, Mayven
Gm46040 8 64775415 to 64811680 36265 + lncRNA gene predicted gene, 46040
D8Mit7 8 64793915 to 64794093 178 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 7
Gm10997 8 64807639 to 64809138 1499 - unclassified gene predicted gene 10997
Gm45345 8 64838234 to 64839390 1156 + antisense lncRNA gene predicted gene 45345
Tssr81430 8 64838307 to 64838324 17 - TSS region transcription start site region 81430
Cpgi20390 8 64849072 to 64850559 1487 CpG island CpG island 20390
Tssr81431 8 64849720 to 64849743 23 - TSS region transcription start site region 81431
Tssr81432 8 64849847 to 64849861 14 - TSS region transcription start site region 81432
Tssr81433 8 64849877 to 64849888 11 - TSS region transcription start site region 81433
Tssr81434 8 64849922 to 64849981 59 - TSS region transcription start site region 81434
Tssr81435 8 64850005 to 64850024 19 - TSS region transcription start site region 81435
Gm40501 8 64876997 to 64881068 4071 - lncRNA gene predicted gene, 40501
Gm45405 8 64910968 to 64911977 1009 - pseudogene predicted gene 45405
Gm26210 8 64931972 to 64932062 90 + unclassified non-coding RNA gene predicted gene, 26210
Gm32507 8 64937959 to 64943988 6029 + lincRNA gene predicted gene, 32507
Gm45242 8 64945590 to 64947718 2128 - unclassified gene predicted gene 45242
Cpgi20391 8 64947070 to 64947852 782 CpG island CpG island 20391
Tssr77538 8 64947177 to 64947255 78 + TSS region transcription start site region 77538
Tmem192 8 64947185 to 64969033 21848 + protein coding gene transmembrane protein 192
Trim75 8 64981651 to 64987644 5993 - protein coding gene tripartite motif-containing 75
Cpgi20392 8 64983621 to 64983789 168 CpG island CpG island 20392
Trim60 8 64999307 to 65018584 19277 - protein coding gene tripartite motif-containing 60
Trim61 8 65012987 to 65018523 5536 - protein coding gene tripartite motif-containing 61
Gm45886 8 65014856 to 65037096 22240 - unclassified non-coding RNA gene predicted gene 45886
Gm45448 8 65015592 to 65015800 208 + pseudogene predicted gene 45448
Tssr81436 8 65018579 to 65018588 9 - TSS region transcription start site region 81436
Apela 8 65028417 to 65037336 8919 - protein coding gene apelin receptor early endogenous ligand
Tssr81437 8 65037102 to 65037132 30 - TSS region transcription start site region 81437
Tssr81438 8 65037139 to 65037171 32 - TSS region transcription start site region 81438
Tssr81439 8 65037176 to 65037191 15 - TSS region transcription start site region 81439
Gm39183 8 65040966 to 65079475 38509 + lncRNA gene predicted gene, 39183
Gm10663 8 65075033 to 65077480 2447 + protein coding gene predicted gene 10663
Smim31 8 65085613 to 65129537 43924 - protein coding gene small integral membrane protein 31
Gm45445 8 65092315 to 65092546 231 - pseudogene predicted gene 45445
Gm48810 8 65093590 to 65094043 453 - pseudogene predicted gene, 48810
Gm24333 8 65093831 to 65093914 83 - miRNA gene predicted gene, 24333
Tssr81440 8 65097737 to 65097740 3 - TSS region transcription start site region 81440
Tssr81441 8 65101085 to 65101098 13 - TSS region transcription start site region 81441
Gm39184 8 65104115 to 65109866 5751 + lncRNA gene predicted gene, 39184
Cpgi20393 8 65107974 to 65108230 256 CpG island CpG island 20393
Tssr81442 8 65129317 to 65129328 11 - TSS region transcription start site region 81442
Tssr81443 8 65129334 to 65129343 9 - TSS region transcription start site region 81443
Tssr81444 8 65129374 to 65129383 9 - TSS region transcription start site region 81444
Tssr81445 8 65129409 to 65129424 15 - TSS region transcription start site region 81445
Tssr81446 8 65129445 to 65129463 18 - TSS region transcription start site region 81446
Tssr81447 8 65129465 to 65129482 17 - TSS region transcription start site region 81447
Tssr81448 8 65129524 to 65129540 16 - TSS region transcription start site region 81448
Tssr81449 8 65129554 to 65129572 18 - TSS region transcription start site region 81449
Tssr81450 8 65129581 to 65129599 18 - TSS region transcription start site region 81450
Tssr81451 8 65129613 to 65129620 7 - TSS region transcription start site region 81451
Gm7619 8 65131033 to 65132314 1281 - pseudogene predicted gene 7619
Tssr81452 8 65132398 to 65132411 13 - TSS region transcription start site region 81452
Gm45249 8 65184244 to 65184591 347 + pseudogene predicted gene 45249
Tssr77539 8 65209105 to 65209115 10 + TSS region transcription start site region 77539
Tssr77540 8 65209116 to 65209134 18 + TSS region transcription start site region 77540
Tssr77541 8 65209135 to 65209161 26 + TSS region transcription start site region 77541
Tssr77542 8 65209165 to 65209185 20 + TSS region transcription start site region 77542
Tssr77543 8 65209194 to 65209206 12 + TSS region transcription start site region 77543
Gm7624 8 65278753 to 65279187 434 - pseudogene predicted gene 7624
Vaultrc-ps1 8 65367300 to 65367442 142 + pseudogene vault RNA component pseudogene 1
Gm25403 8 65367301 to 65367443 142 + unclassified non-coding RNA gene predicted gene, 25403
D8Mit30 8 65426351 to 65426511 160 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 30
March1 8 65617922 to 66471637 853715 + protein coding gene membrane-associated ring finger (C3HC4) 1
Tssr77544 8 65618029 to 65618091 62 + TSS region transcription start site region 77544
Tssr77545 8 65639360 to 65639371 11 + TSS region transcription start site region 77545
Tssr77546 8 65639862 to 65639866 4 + TSS region transcription start site region 77546
Gm23515 8 65667595 to 65667701 106 - snRNA gene predicted gene, 23515
D8Mit132 8 65792939 to 65793021 82 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 132
Alaa3 8 65792939 to 65793021 82 QTL alopecia areata 3
Gm15355 8 65817311 to 65817595 284 - pseudogene predicted gene 15355
Tssr77547 8 65820594 to 65820599 5 + TSS region transcription start site region 77547
Gm26123 8 65902057 to 65902191 134 + snoRNA gene predicted gene, 26123
D8Mit131 8 65958678 to 65958804 126 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 131
D8Dcr27 8 65958700 to 65958804 104 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 27
Tssr77548 8 65966638 to 65966645 7 + TSS region transcription start site region 77548
Tssr77549 8 65966659 to 65966664 5 + TSS region transcription start site region 77549
Tssr77550 8 65966677 to 65966695 18 + TSS region transcription start site region 77550
Tssr77551 8 65967166 to 65967191 25 + TSS region transcription start site region 77551
Gm24205 8 66002346 to 66002452 106 - snRNA gene predicted gene, 24205
B230308H17Rik 8 66139015 to 66140711 1696 unclassified gene RIKEN cDNA B230308H17 gene
Tssr2582 8 66330847 to 66330851 4 - TSS region transcription start site region 2582
Gm15354 8 66384623 to 66387535 2912 - antisense lncRNA gene predicted gene 15354
Tssr77552 8 66386188 to 66386214 26 + TSS region transcription start site region 77552
Tssr2583 8 66386260 to 66386271 11 + TSS region transcription start site region 2583
Tssr77553 8 66386292 to 66386308 16 + TSS region transcription start site region 77553
Tssr2584 8 66386337 to 66386346 9 + TSS region transcription start site region 2584
Tssr2585 8 66386396 to 66386414 18 + TSS region transcription start site region 2585
Tssr2586 8 66386420 to 66386432 12 + TSS region transcription start site region 2586
Tssr2587 8 66386449 to 66386462 13 + TSS region transcription start site region 2587
Tssr77554 8 66386809 to 66386820 11 + TSS region transcription start site region 77554
Tssr77555 8 66392143 to 66392193 50 + TSS region transcription start site region 77555
Tssr77556 8 66397236 to 66397263 27 + TSS region transcription start site region 77556
Tssr77557 8 66397677 to 66397682 5 + TSS region transcription start site region 77557
Tssr77558 8 66400506 to 66400528 22 + TSS region transcription start site region 77558
Tssr77559 8 66420364 to 66420376 12 + TSS region transcription start site region 77559
Tssr77560 8 66425842 to 66425871 29 + TSS region transcription start site region 77560
Tssr77561 8 66426860 to 66426901 41 + TSS region transcription start site region 77561
Tssr77562 8 66431370 to 66431372 2 + TSS region transcription start site region 77562
Gm15356 8 66439455 to 66442809 3354 - antisense lncRNA gene predicted gene 15356
Tssr77563 8 66442548 to 66442559 11 + TSS region transcription start site region 77563
Tssr77564 8 66443321 to 66443325 4 + TSS region transcription start site region 77564
Tssr77565 8 66444141 to 66444145 4 + TSS region transcription start site region 77565
Tssr77566 8 66469027 to 66469032 5 + TSS region transcription start site region 77566
Tssr77567 8 66469163 to 66469195 32 + TSS region transcription start site region 77567
Tssr77568 8 66469247 to 66469265 18 + TSS region transcription start site region 77568
Tssr77569 8 66470951 to 66470966 15 + TSS region transcription start site region 77569
Tssr77570 8 66471510 to 66471539 29 + TSS region transcription start site region 77570
Tssr77571 8 66471544 to 66471557 13 + TSS region transcription start site region 77571
Tssr77572 8 66471880 to 66471924 44 + TSS region transcription start site region 77572
Tssr77573 8 66472426 to 66472432 6 + TSS region transcription start site region 77573
Tma16 8 66473118 to 66486530 13412 - protein coding gene translation machinery associated 16
Tssr81453 8 66480383 to 66480417 34 - TSS region transcription start site region 81453
Tssr81454 8 66481336 to 66481341 5 - TSS region transcription start site region 81454
Tssr81455 8 66484015 to 66484025 10 - TSS region transcription start site region 81455
Cpgi20394 8 66486058 to 66486718 660 CpG island CpG island 20394
Tssr81456 8 66486452 to 66486469 17 - TSS region transcription start site region 81456
Tssr81457 8 66486494 to 66486539 45 - TSS region transcription start site region 81457
Tssr81458 8 66486540 to 66486551 11 - TSS region transcription start site region 81458
Tssr81459 8 66490740 to 66490779 39 - TSS region transcription start site region 81459
Tssr77574 8 66491007 to 66491028 21 + TSS region transcription start site region 77574
Gm32568 8 66495059 to 66496946 1887 + lincRNA gene predicted gene, 32568
Cpgi20395 8 66511611 to 66512383 772 CpG island CpG island 20395
Tssr77575 8 66511732 to 66511743 11 + TSS region transcription start site region 77575
Tssr77576 8 66511751 to 66511764 13 + TSS region transcription start site region 77576
Tktl2 8 66511756 to 66518335 6579 + protein coding gene transketolase-like 2
Gm16330 8 66588712 to 66589008 296 - pseudogene predicted gene 16330
Npy5r 8 66679965 to 66688128 8163 - protein coding gene neuropeptide Y receptor Y5
Cpgi20396 8 66687528 to 66688206 678 CpG island CpG island 20396
Tssr77577 8 66697162 to 66697209 47 + TSS region transcription start site region 77577
Npy1r 8 66697192 to 66706792 9600 + protein coding gene neuropeptide Y receptor Y1
Tssr77578 8 66697251 to 66697262 11 + TSS region transcription start site region 77578
Tssr77579 8 66697264 to 66697273 9 + TSS region transcription start site region 77579
Tssr77580 8 66697404 to 66697428 24 + TSS region transcription start site region 77580
Tssr77581 8 66697444 to 66697461 17 + TSS region transcription start site region 77581
Tssr77582 8 66697466 to 66697483 17 + TSS region transcription start site region 77582
Tssr77583 8 66704548 to 66704593 45 + TSS region transcription start site region 77583
Gm45911 8 66780080 to 66795561 15481 + lincRNA gene predicted gene 45911