Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:64194103-65024113

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tll1 8 64014931 to 64206271 191340 - protein coding gene tolloid-like
Cpgi20385 8 64204349 to 64204549 200 CpG island CpG island 20385
Cpgi20386 8 64204973 to 64206023 1050 CpG island CpG island 20386
Tssr81411 8 64205970 to 64206011 41 - TSS region transcription start site region 81411
Cpgi20387 8 64206240 to 64206658 418 CpG island CpG island 20387
D8Mit232 8 64229550 to 64229655 105 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 232
Gm35472 8 64236378 to 64237497 1119 + lncRNA gene predicted gene, 35472
Bodwt4 8 64404929 to 64404929 0 QTL body weight 4
Gm35521 8 64408643 to 64417100 8457 - lincRNA gene predicted gene, 35521
Tssr77535 8 64445607 to 64445621 14 + TSS region transcription start site region 77535
D8Mit261 8 64498733 to 64498905 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 261
Mir710 8 64514332 to 64514441 109 - miRNA gene microRNA 710
Tssr77536 8 64543849 to 64543854 5 + TSS region transcription start site region 77536
Cpe 8 64592542 to 64693054 100512 - protein coding gene carboxypeptidase E
Tssr81412 8 64592871 to 64592899 28 - TSS region transcription start site region 81412
Tssr81413 8 64609103 to 64609113 10 - TSS region transcription start site region 81413
Tssr81414 8 64609124 to 64609139 15 - TSS region transcription start site region 81414
Tssr81415 8 64617639 to 64617650 11 - TSS region transcription start site region 81415
Tssr81416 8 64617652 to 64617663 11 - TSS region transcription start site region 81416
Tssr81417 8 64619483 to 64619508 25 - TSS region transcription start site region 81417
Tssr77537 8 64619490 to 64619510 20 + TSS region transcription start site region 77537
Tssr81418 8 64620491 to 64620499 8 - TSS region transcription start site region 81418
Adip4 8 64637030 to 64637146 116 QTL adiposity 4
Char11 8 64637030 to 64637146 116 QTL P. chabaudi malaria resistance QTL 11
D8Mit25 8 64637030 to 64637146 116 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 25
9330197I21Rik 8 64654526 to 64659524 4998 unclassified gene RIKEN cDNA 9330197I21 gene
Tssr81419 8 64689477 to 64689488 11 - TSS region transcription start site region 81419
Tssr81420 8 64692449 to 64692454 5 - TSS region transcription start site region 81420
Cpgi20388 8 64692486 to 64693314 828 CpG island CpG island 20388
Tssr81421 8 64692948 to 64692979 31 - TSS region transcription start site region 81421
Tssr81422 8 64692980 to 64692994 14 - TSS region transcription start site region 81422
Tssr81423 8 64692995 to 64693021 26 - TSS region transcription start site region 81423
Tssr81424 8 64693027 to 64693038 11 - TSS region transcription start site region 81424
Tssr81425 8 64693045 to 64693074 29 - TSS region transcription start site region 81425
Gm45518 8 64701107 to 64711076 9969 - lincRNA gene predicted gene 45518
Msmo1 8 64718145 to 64733578 15433 - protein coding gene methylsterol monoxygenase 1
Tssr81426 8 64718670 to 64718691 21 - TSS region transcription start site region 81426
Tssr81427 8 64718966 to 64719001 35 - TSS region transcription start site region 81427
Cpgi20389 8 64733156 to 64733993 837 CpG island CpG island 20389
Tssr81428 8 64733534 to 64733554 20 - TSS region transcription start site region 81428
Tssr81429 8 64733570 to 64733584 14 - TSS region transcription start site region 81429
Skull11 8 64737134 to 64737254 120 QTL skull morphology 11
D8Mit8 8 64737134 to 64737254 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 8
Klhl2 8 64739675 to 64850017 110342 - protein coding gene kelch-like 2, Mayven
Gm46040 8 64775415 to 64811680 36265 + lncRNA gene predicted gene, 46040
D8Mit7 8 64793915 to 64794093 178 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 7
Gm10997 8 64807639 to 64809138 1499 - unclassified gene predicted gene 10997
Gm45345 8 64838234 to 64839390 1156 + antisense lncRNA gene predicted gene 45345
Tssr81430 8 64838307 to 64838324 17 - TSS region transcription start site region 81430
Cpgi20390 8 64849072 to 64850559 1487 CpG island CpG island 20390
Tssr81431 8 64849720 to 64849743 23 - TSS region transcription start site region 81431
Tssr81432 8 64849847 to 64849861 14 - TSS region transcription start site region 81432
Tssr81433 8 64849877 to 64849888 11 - TSS region transcription start site region 81433
Tssr81434 8 64849922 to 64849981 59 - TSS region transcription start site region 81434
Tssr81435 8 64850005 to 64850024 19 - TSS region transcription start site region 81435
Gm40501 8 64876997 to 64881068 4071 - lncRNA gene predicted gene, 40501
Gm45405 8 64910968 to 64911977 1009 - pseudogene predicted gene 45405
Gm26210 8 64931972 to 64932062 90 + unclassified non-coding RNA gene predicted gene, 26210
Gm32507 8 64937959 to 64943988 6029 + lincRNA gene predicted gene, 32507
Gm45242 8 64945590 to 64947718 2128 - unclassified gene predicted gene 45242
Cpgi20391 8 64947070 to 64947852 782 CpG island CpG island 20391
Tssr77538 8 64947177 to 64947255 78 + TSS region transcription start site region 77538
Tmem192 8 64947185 to 64969033 21848 + protein coding gene transmembrane protein 192
Trim75 8 64981651 to 64987644 5993 - protein coding gene tripartite motif-containing 75
Cpgi20392 8 64983621 to 64983789 168 CpG island CpG island 20392
Trim60 8 64999307 to 65018584 19277 - protein coding gene tripartite motif-containing 60
Trim61 8 65012987 to 65018523 5536 - protein coding gene tripartite motif-containing 61
Gm45886 8 65014856 to 65037096 22240 - unclassified non-coding RNA gene predicted gene 45886
Gm45448 8 65015592 to 65015800 208 + pseudogene predicted gene 45448
Tssr81436 8 65018579 to 65018588 9 - TSS region transcription start site region 81436