Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:62468051-65089052

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110 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hspd1-ps2 8 62486792 to 62488488 1696 - pseudogene heat shock protein 1 (chaperonin), pseudogene 2
D8Mit70 8 62488890 to 62489062 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 70
Gm2975 8 62539650 to 62540469 819 + pseudogene predicted gene 2975
Gm7561 8 62546946 to 62547831 885 - pseudogene predicted gene 7561
Tssr81408 8 62547853 to 62547873 20 - TSS region transcription start site region 81408
Gm45460 8 62616317 to 62634645 18328 - lincRNA gene predicted gene 45460
Gm45459 8 62646335 to 62855382 209047 - lincRNA gene predicted gene 45459
Gm45462 8 62749686 to 62761858 12172 + lincRNA gene predicted gene 45462
Gm22324 8 62783612 to 62783725 113 + snoRNA gene predicted gene, 22324
Tssr81409 8 62892682 to 62892684 2 - TSS region transcription start site region 81409
Spock3 8 62951091 to 63357101 406010 + protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
Tssr77532 8 62951195 to 62951215 20 + TSS region transcription start site region 77532
Cpgi20383 8 62951343 to 62952018 675 CpG island CpG island 20383
Tssr77533 8 62951391 to 62951498 107 + TSS region transcription start site region 77533
Tssr77534 8 62958972 to 62958977 5 + TSS region transcription start site region 77534
Gm45461 8 62979221 to 62983755 4534 + unclassified gene predicted gene 45461
Gm45516 8 63020866 to 63025047 4181 + unclassified gene predicted gene 45516
D8Dcr26 8 63091976 to 63092076 100 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 26
Gm24236 8 63108674 to 63108807 133 - snoRNA gene predicted gene, 24236
Gm45517 8 63198972 to 63201439 2467 + unclassified gene predicted gene 45517
D8Mit367 8 63268412 to 63268508 96 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology-367
Gm18645 8 63522936 to 63525890 2954 + pseudogene predicted gene, 18645
Gm35368 8 63545943 to 63552805 6862 + lincRNA gene predicted gene, 35368
Gm45589 8 63700863 to 63739577 38714 - lincRNA gene predicted gene 45589
Gm35424 8 63748212 to 63777476 29264 - lncRNA gene predicted gene, 35424
Gm5350 8 63778051 to 63779052 1001 + pseudogene predicted gene 5350
Tssr81410 8 63828245 to 63828256 11 - TSS region transcription start site region 81410
Gm24580 8 63878196 to 63878326 130 + snoRNA gene predicted gene, 24580
Sgo2b 8 63924694 to 63952170 27476 - protein coding gene shugoshin 2B
Gm35713 8 63933164 to 63933362 198 + pseudogene predicted gene, 35713
Cpgi20384 8 63951883 to 63952418 535 CpG island CpG island 20384
Gm45513 8 63999252 to 63999627 375 - pseudogene predicted gene 45513
Tll1 8 64014931 to 64206271 191340 - protein coding gene tolloid-like
Gm22586 8 64161405 to 64161526 121 + rRNA gene predicted gene, 22586
Cpgi20385 8 64204349 to 64204549 200 CpG island CpG island 20385
Cpgi20386 8 64204973 to 64206023 1050 CpG island CpG island 20386
Tssr81411 8 64205970 to 64206011 41 - TSS region transcription start site region 81411
Cpgi20387 8 64206240 to 64206658 418 CpG island CpG island 20387
D8Mit232 8 64229550 to 64229655 105 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 232
Gm35472 8 64236378 to 64237497 1119 + lncRNA gene predicted gene, 35472
Bodwt4 8 64404929 to 64404929 0 QTL body weight 4
Gm35521 8 64408643 to 64417100 8457 - lincRNA gene predicted gene, 35521
Tssr77535 8 64445607 to 64445621 14 + TSS region transcription start site region 77535
D8Mit261 8 64498733 to 64498905 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 261
Mir710 8 64514332 to 64514441 109 - miRNA gene microRNA 710
Tssr77536 8 64543849 to 64543854 5 + TSS region transcription start site region 77536
Cpe 8 64592542 to 64693054 100512 - protein coding gene carboxypeptidase E
Tssr81412 8 64592871 to 64592899 28 - TSS region transcription start site region 81412
Tssr81413 8 64609103 to 64609113 10 - TSS region transcription start site region 81413
Tssr81414 8 64609124 to 64609139 15 - TSS region transcription start site region 81414
Tssr81415 8 64617639 to 64617650 11 - TSS region transcription start site region 81415
Tssr81416 8 64617652 to 64617663 11 - TSS region transcription start site region 81416
Tssr81417 8 64619483 to 64619508 25 - TSS region transcription start site region 81417
Tssr77537 8 64619490 to 64619510 20 + TSS region transcription start site region 77537
Tssr81418 8 64620491 to 64620499 8 - TSS region transcription start site region 81418
Char11 8 64637030 to 64637146 116 QTL P. chabaudi malaria resistance QTL 11
Adip4 8 64637030 to 64637146 116 QTL adiposity 4
D8Mit25 8 64637030 to 64637146 116 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 25
9330197I21Rik 8 64654526 to 64659524 4998 unclassified gene RIKEN cDNA 9330197I21 gene
Tssr81419 8 64689477 to 64689488 11 - TSS region transcription start site region 81419
Tssr81420 8 64692449 to 64692454 5 - TSS region transcription start site region 81420
Cpgi20388 8 64692486 to 64693314 828 CpG island CpG island 20388
Tssr81421 8 64692948 to 64692979 31 - TSS region transcription start site region 81421
Tssr81422 8 64692980 to 64692994 14 - TSS region transcription start site region 81422
Tssr81423 8 64692995 to 64693021 26 - TSS region transcription start site region 81423
Tssr81424 8 64693027 to 64693038 11 - TSS region transcription start site region 81424
Tssr81425 8 64693045 to 64693074 29 - TSS region transcription start site region 81425
Gm45518 8 64701107 to 64711076 9969 - lincRNA gene predicted gene 45518
Msmo1 8 64718145 to 64733578 15433 - protein coding gene methylsterol monoxygenase 1
Tssr81426 8 64718670 to 64718691 21 - TSS region transcription start site region 81426
Tssr81427 8 64718966 to 64719001 35 - TSS region transcription start site region 81427
Cpgi20389 8 64733156 to 64733993 837 CpG island CpG island 20389
Tssr81428 8 64733534 to 64733554 20 - TSS region transcription start site region 81428
Tssr81429 8 64733570 to 64733584 14 - TSS region transcription start site region 81429
Skull11 8 64737134 to 64737254 120 QTL skull morphology 11
D8Mit8 8 64737134 to 64737254 120 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 8
Klhl2 8 64739675 to 64850017 110342 - protein coding gene kelch-like 2, Mayven
Gm46040 8 64775415 to 64811680 36265 + lncRNA gene predicted gene, 46040
D8Mit7 8 64793915 to 64794093 178 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 7
Gm10997 8 64807639 to 64809138 1499 - unclassified gene predicted gene 10997
Gm45345 8 64838234 to 64839390 1156 + antisense lncRNA gene predicted gene 45345
Tssr81430 8 64838307 to 64838324 17 - TSS region transcription start site region 81430
Cpgi20390 8 64849072 to 64850559 1487 CpG island CpG island 20390
Tssr81431 8 64849720 to 64849743 23 - TSS region transcription start site region 81431
Tssr81432 8 64849847 to 64849861 14 - TSS region transcription start site region 81432
Tssr81433 8 64849877 to 64849888 11 - TSS region transcription start site region 81433
Tssr81434 8 64849922 to 64849981 59 - TSS region transcription start site region 81434
Tssr81435 8 64850005 to 64850024 19 - TSS region transcription start site region 81435
Gm40501 8 64876997 to 64881068 4071 - lncRNA gene predicted gene, 40501
Gm45405 8 64910968 to 64911977 1009 - pseudogene predicted gene 45405
Gm26210 8 64931972 to 64932062 90 + unclassified non-coding RNA gene predicted gene, 26210
Gm32507 8 64937959 to 64943988 6029 + lincRNA gene predicted gene, 32507
Gm45242 8 64945590 to 64947718 2128 - unclassified gene predicted gene 45242
Cpgi20391 8 64947070 to 64947852 782 CpG island CpG island 20391
Tssr77538 8 64947177 to 64947255 78 + TSS region transcription start site region 77538
Tmem192 8 64947185 to 64969033 21848 + protein coding gene transmembrane protein 192
Trim75 8 64981651 to 64987644 5993 - protein coding gene tripartite motif-containing 75
Cpgi20392 8 64983621 to 64983789 168 CpG island CpG island 20392
Trim60 8 64999307 to 65018584 19277 - protein coding gene tripartite motif-containing 60
Trim61 8 65012987 to 65018523 5536 - protein coding gene tripartite motif-containing 61
Gm45886 8 65014856 to 65037096 22240 - unclassified non-coding RNA gene predicted gene 45886
Gm45448 8 65015592 to 65015800 208 + pseudogene predicted gene 45448
Tssr81436 8 65018579 to 65018588 9 - TSS region transcription start site region 81436
Apela 8 65028417 to 65037336 8919 - protein coding gene apelin receptor early endogenous ligand
Tssr81437 8 65037102 to 65037132 30 - TSS region transcription start site region 81437
Tssr81438 8 65037139 to 65037171 32 - TSS region transcription start site region 81438
Tssr81439 8 65037176 to 65037191 15 - TSS region transcription start site region 81439
Gm39183 8 65040966 to 65079475 38509 + lncRNA gene predicted gene, 39183
Gm10663 8 65075033 to 65077480 2447 + protein coding gene predicted gene 10663
Smim31 8 65085613 to 65129537 43924 - protein coding gene small integral membrane protein 31