Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:61919650-63160469

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930512H18Rik 8 61912666 to 61924768 12102 + antisense lncRNA gene RIKEN cDNA 4930512H18 gene
Gm45418 8 61921746 to 61928028 6282 - bidirectional promoter lncRNA gene predicted gene 45418
Tssr81402 8 61927967 to 61928044 77 - TSS region transcription start site region 81402
Ddx60 8 61928064 to 62037704 109640 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
Tssr77497 8 61928081 to 61928094 13 + TSS region transcription start site region 77497
Cpgi20382 8 61928109 to 61928265 156 CpG island CpG island 20382
Tssr77498 8 61928113 to 61928127 14 + TSS region transcription start site region 77498
Tssr77499 8 61931099 to 61931119 20 + TSS region transcription start site region 77499
Tssr77500 8 61931584 to 61931596 12 + TSS region transcription start site region 77500
Tssr77501 8 61933957 to 61933972 15 + TSS region transcription start site region 77501
Tssr77502 8 61935071 to 61935098 27 + TSS region transcription start site region 77502
Tssr77503 8 61936072 to 61936085 13 + TSS region transcription start site region 77503
Tssr77504 8 61936151 to 61936164 13 + TSS region transcription start site region 77504
Tssr77505 8 61936255 to 61936286 31 + TSS region transcription start site region 77505
Tssr77506 8 61938190 to 61938212 22 + TSS region transcription start site region 77506
Tssr77507 8 61942777 to 61942787 10 + TSS region transcription start site region 77507
Tssr77508 8 61947404 to 61947416 12 + TSS region transcription start site region 77508
Tssr77509 8 61947432 to 61947444 12 + TSS region transcription start site region 77509
Tssr77510 8 61947543 to 61947555 12 + TSS region transcription start site region 77510
Tssr77511 8 61947631 to 61947646 15 + TSS region transcription start site region 77511
Tssr77512 8 61947687 to 61947703 16 + TSS region transcription start site region 77512
Tssr77513 8 61951820 to 61951823 3 + TSS region transcription start site region 77513
Tssr77514 8 61952010 to 61952047 37 + TSS region transcription start site region 77514
Tssr77515 8 61963644 to 61963654 10 + TSS region transcription start site region 77515
Tssr77516 8 61967490 to 61967514 24 + TSS region transcription start site region 77516
Tssr77517 8 61976251 to 61976266 15 + TSS region transcription start site region 77517
Tssr77518 8 61976379 to 61976394 15 + TSS region transcription start site region 77518
Tssr77519 8 61976820 to 61976833 13 + TSS region transcription start site region 77519
Tssr77520 8 61976850 to 61976868 18 + TSS region transcription start site region 77520
Tssr77521 8 61976990 to 61977002 12 + TSS region transcription start site region 77521
Tssr77522 8 61977571 to 61977586 15 + TSS region transcription start site region 77522
Tssr77523 8 61984001 to 61984004 3 + TSS region transcription start site region 77523
Tssr77524 8 61984714 to 61984720 6 + TSS region transcription start site region 77524
Tssr77525 8 61986903 to 61986913 10 + TSS region transcription start site region 77525
Tssr77526 8 61988460 to 61988509 49 + TSS region transcription start site region 77526
Tssr77527 8 61995839 to 61995843 4 + TSS region transcription start site region 77527
Tssr77528 8 62002102 to 62002107 5 + TSS region transcription start site region 77528
Tssr77529 8 62014424 to 62014436 12 + TSS region transcription start site region 77529
Tssr77530 8 62017134 to 62017155 21 + TSS region transcription start site region 77530
Tssr77531 8 62025046 to 62025057 11 + TSS region transcription start site region 77531
Anxa10 8 62057042 to 62123150 66108 - protein coding gene annexin A10
Tssr81403 8 62123106 to 62123123 17 - TSS region transcription start site region 81403
Tssr81404 8 62123129 to 62123138 9 - TSS region transcription start site region 81404
Tssr81405 8 62123144 to 62123155 11 - TSS region transcription start site region 81405
Tssr81406 8 62123186 to 62123200 14 - TSS region transcription start site region 81406
Tssr81407 8 62123304 to 62123328 24 - TSS region transcription start site region 81407
Gm2961 8 62193441 to 62194212 771 - pseudogene predicted gene 2961
Hspd1-ps2 8 62486792 to 62488488 1696 - pseudogene heat shock protein 1 (chaperonin), pseudogene 2
D8Mit70 8 62488890 to 62489062 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 70
Gm2975 8 62539650 to 62540469 819 + pseudogene predicted gene 2975
Gm7561 8 62546946 to 62547831 885 - pseudogene predicted gene 7561
Tssr81408 8 62547853 to 62547873 20 - TSS region transcription start site region 81408
Gm45460 8 62616317 to 62634645 18328 - lincRNA gene predicted gene 45460
Gm45459 8 62646335 to 62855382 209047 - lincRNA gene predicted gene 45459
Gm45462 8 62749686 to 62761858 12172 + lincRNA gene predicted gene 45462
Gm22324 8 62783612 to 62783725 113 + snoRNA gene predicted gene, 22324
Tssr81409 8 62892682 to 62892684 2 - TSS region transcription start site region 81409
Spock3 8 62951091 to 63357101 406010 + protein coding gene sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3
Tssr77532 8 62951195 to 62951215 20 + TSS region transcription start site region 77532
Cpgi20383 8 62951343 to 62952018 675 CpG island CpG island 20383
Tssr77533 8 62951391 to 62951498 107 + TSS region transcription start site region 77533
Tssr77534 8 62958972 to 62958977 5 + TSS region transcription start site region 77534
Gm45461 8 62979221 to 62983755 4534 + unclassified gene predicted gene 45461
Gm45516 8 63020866 to 63025047 4181 + unclassified gene predicted gene 45516
D8Dcr26 8 63091976 to 63092076 100 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 26
Gm24236 8 63108674 to 63108807 133 - snoRNA gene predicted gene, 24236