Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:61623304-62623328

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Palld 8 61511433 to 61902690 391257 - protein coding gene palladin, cytoskeletal associated protein
Gm35254 8 61627808 to 61631325 3517 + lncRNA gene predicted gene, 35254
Gm3014 8 61662002 to 61663992 1990 unclassified gene predicted gene 3014
Tssr81387 8 61663755 to 61663770 15 - TSS region transcription start site region 81387
Tssr81388 8 61663797 to 61663845 48 - TSS region transcription start site region 81388
Tssr77492 8 61687363 to 61687376 13 + TSS region transcription start site region 77492
Tssr81389 8 61698031 to 61698034 3 - TSS region transcription start site region 81389
Tssr2578 8 61700318 to 61700333 15 - TSS region transcription start site region 2578
Tssr81390 8 61700440 to 61700456 16 - TSS region transcription start site region 81390
Tssr81391 8 61703173 to 61703187 14 - TSS region transcription start site region 81391
Tssr77493 8 61713581 to 61713592 11 + TSS region transcription start site region 77493
Tssr2579 8 61715530 to 61715544 14 + TSS region transcription start site region 2579
Tssr81392 8 61732349 to 61732392 43 - TSS region transcription start site region 81392
Tssr77494 8 61742549 to 61742578 29 + TSS region transcription start site region 77494
Cpgi20381 8 61759630 to 61760329 699 CpG island CpG island 20381
Tssr81393 8 61760020 to 61760036 16 - TSS region transcription start site region 81393
Tssr81394 8 61760038 to 61760061 23 - TSS region transcription start site region 81394
Tssr81395 8 61760067 to 61760103 36 - TSS region transcription start site region 81395
Tssr81396 8 61760419 to 61760422 3 - TSS region transcription start site region 81396
Tssr81397 8 61768835 to 61768840 5 - TSS region transcription start site region 81397
Tssr81398 8 61785149 to 61785152 3 - TSS region transcription start site region 81398
Gm18066 8 61819743 to 61821516 1773 - pseudogene predicted gene, 18066
Tssr81399 8 61869653 to 61869656 3 - TSS region transcription start site region 81399
Tssr81400 8 61877560 to 61877591 31 - TSS region transcription start site region 81400
D8Ertd252e 8 61878608 to 61878825 217 DNA segment DNA segment, Chr 8, ERATO Doi 252, expressed
Tssr81401 8 61902673 to 61902713 40 - TSS region transcription start site region 81401
Tssr2580 8 61902736 to 61902741 5 - TSS region transcription start site region 2580
Tssr2581 8 61902751 to 61902762 11 - TSS region transcription start site region 2581
Tssr77495 8 61909532 to 61909558 26 + TSS region transcription start site region 77495
4930512H18Rik 8 61912666 to 61924768 12102 + antisense lncRNA gene RIKEN cDNA 4930512H18 gene
Tssr77496 8 61913059 to 61913063 4 + TSS region transcription start site region 77496
Gm45418 8 61921746 to 61928028 6282 - bidirectional promoter lncRNA gene predicted gene 45418
Tssr81402 8 61927967 to 61928044 77 - TSS region transcription start site region 81402
Ddx60 8 61928064 to 62037704 109640 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
Tssr77497 8 61928081 to 61928094 13 + TSS region transcription start site region 77497
Cpgi20382 8 61928109 to 61928265 156 CpG island CpG island 20382
Tssr77498 8 61928113 to 61928127 14 + TSS region transcription start site region 77498
Tssr77499 8 61931099 to 61931119 20 + TSS region transcription start site region 77499
Tssr77500 8 61931584 to 61931596 12 + TSS region transcription start site region 77500
Tssr77501 8 61933957 to 61933972 15 + TSS region transcription start site region 77501
Tssr77502 8 61935071 to 61935098 27 + TSS region transcription start site region 77502
Tssr77503 8 61936072 to 61936085 13 + TSS region transcription start site region 77503
Tssr77504 8 61936151 to 61936164 13 + TSS region transcription start site region 77504
Tssr77505 8 61936255 to 61936286 31 + TSS region transcription start site region 77505
Tssr77506 8 61938190 to 61938212 22 + TSS region transcription start site region 77506
Tssr77507 8 61942777 to 61942787 10 + TSS region transcription start site region 77507
Tssr77508 8 61947404 to 61947416 12 + TSS region transcription start site region 77508
Tssr77509 8 61947432 to 61947444 12 + TSS region transcription start site region 77509
Tssr77510 8 61947543 to 61947555 12 + TSS region transcription start site region 77510
Tssr77511 8 61947631 to 61947646 15 + TSS region transcription start site region 77511
Tssr77512 8 61947687 to 61947703 16 + TSS region transcription start site region 77512
Tssr77513 8 61951820 to 61951823 3 + TSS region transcription start site region 77513
Tssr77514 8 61952010 to 61952047 37 + TSS region transcription start site region 77514
Tssr77515 8 61963644 to 61963654 10 + TSS region transcription start site region 77515
Tssr77516 8 61967490 to 61967514 24 + TSS region transcription start site region 77516
Tssr77517 8 61976251 to 61976266 15 + TSS region transcription start site region 77517
Tssr77518 8 61976379 to 61976394 15 + TSS region transcription start site region 77518
Tssr77519 8 61976820 to 61976833 13 + TSS region transcription start site region 77519
Tssr77520 8 61976850 to 61976868 18 + TSS region transcription start site region 77520
Tssr77521 8 61976990 to 61977002 12 + TSS region transcription start site region 77521
Tssr77522 8 61977571 to 61977586 15 + TSS region transcription start site region 77522
Tssr77523 8 61984001 to 61984004 3 + TSS region transcription start site region 77523
Tssr77524 8 61984714 to 61984720 6 + TSS region transcription start site region 77524
Tssr77525 8 61986903 to 61986913 10 + TSS region transcription start site region 77525
Tssr77526 8 61988460 to 61988509 49 + TSS region transcription start site region 77526
Tssr77527 8 61995839 to 61995843 4 + TSS region transcription start site region 77527
Tssr77528 8 62002102 to 62002107 5 + TSS region transcription start site region 77528
Tssr77529 8 62014424 to 62014436 12 + TSS region transcription start site region 77529
Tssr77530 8 62017134 to 62017155 21 + TSS region transcription start site region 77530
Tssr77531 8 62025046 to 62025057 11 + TSS region transcription start site region 77531
Anxa10 8 62057042 to 62123150 66108 - protein coding gene annexin A10
Tssr81403 8 62123106 to 62123123 17 - TSS region transcription start site region 81403
Tssr81404 8 62123129 to 62123138 9 - TSS region transcription start site region 81404
Tssr81405 8 62123144 to 62123155 11 - TSS region transcription start site region 81405
Tssr81406 8 62123186 to 62123200 14 - TSS region transcription start site region 81406
Tssr81407 8 62123304 to 62123328 24 - TSS region transcription start site region 81407
Gm2961 8 62193441 to 62194212 771 - pseudogene predicted gene 2961
Hspd1-ps2 8 62486792 to 62488488 1696 - pseudogene heat shock protein 1 (chaperonin), pseudogene 2
D8Mit70 8 62488890 to 62489062 172 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 70
Gm2975 8 62539650 to 62540469 819 + pseudogene predicted gene 2975
Gm7561 8 62546946 to 62547831 885 - pseudogene predicted gene 7561
Tssr81408 8 62547853 to 62547873 20 - TSS region transcription start site region 81408
Gm45460 8 62616317 to 62634645 18328 - lincRNA gene predicted gene 45460