MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:60905440-61025470

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hpf1	8	60890394 to 60907580	17186	+	protein coding gene	histone PARylation factor 1
Clcn3	8	60910389 to 60983300	72911	-	protein coding gene	chloride channel, voltage-sensitive 3
Gm18394	8	60935642 to 60936200	558	+	pseudogene	predicted gene, 18394
Tssr81364	8	60941400 to 60941417	17	-	TSS region	transcription start site region 81364
Tssr81365	8	60951915 to 60951918	3	-	TSS region	transcription start site region 81365
Tssr81366	8	60954726 to 60954790	64	-	TSS region	transcription start site region 81366
Tssr81367	8	60954792 to 60954803	11	-	TSS region	transcription start site region 81367
Tssr81368	8	60954868 to 60954877	9	-	TSS region	transcription start site region 81368
9030622M22Rik	8	60963038 to 60965021	1983		unclassified gene	RIKEN cDNA 9030622M22 gene
Tssr81369	8	60965440 to 60965470	30	-	TSS region	transcription start site region 81369
Cpgi20373	8	60982646 to 60983929	1283		CpG island	CpG island 20373
Tssr81370	8	60983215 to 60983319	104	-	TSS region	transcription start site region 81370
B230317F23Rik	8	60983437 to 60985908	2471	+	lincRNA gene	RIKEN cDNA B230317F23 gene
Cpgi20374	8	60992725 to 60993818	1093		CpG island	CpG island 20374
Tssr77475	8	60993189 to 60993247	58	+	TSS region	transcription start site region 77475
Nek1	8	60993195 to 61131346	138151	+	protein coding gene	NIMA (never in mitosis gene a)-related expressed kinase 1
Tssr77476	8	60993553 to 60993568	15	+	TSS region	transcription start site region 77476
Gm45484	8	61024131 to 61025271	1140	+	unclassified gene	predicted gene 45484