Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:60708038-61220021

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45650 8 60719291 to 60725806 6515 + lincRNA gene predicted gene 45650
Gm45651 8 60757119 to 60757453 334 + pseudogene predicted gene 45651
Stambp-ps2 8 60792859 to 60793697 838 + pseudogene STAM binding protein, pseudogene 2
Gm23329 8 60807739 to 60807846 107 - snoRNA gene predicted gene, 23329
Tssr77467 8 60842299 to 60842312 13 + TSS region transcription start site region 77467
Tssr77468 8 60842342 to 60842354 12 + TSS region transcription start site region 77468
Gm45485 8 60846312 to 60846668 356 + pseudogene predicted gene 45485
Tssr77469 8 60863844 to 60863848 4 + TSS region transcription start site region 77469
Tssr77470 8 60864534 to 60864544 10 + TSS region transcription start site region 77470
Tssr77471 8 60870015 to 60870019 4 + TSS region transcription start site region 77471
Cpgi20372 8 60890108 to 60890850 742 CpG island CpG island 20372
Tssr77472 8 60890387 to 60890401 14 + TSS region transcription start site region 77472
Hpf1 8 60890394 to 60907580 17186 + protein coding gene histone PARylation factor 1
Tssr77473 8 60890410 to 60890483 73 + TSS region transcription start site region 77473
Tssr81363 8 60891447 to 60891469 22 - TSS region transcription start site region 81363
Tssr77474 8 60895567 to 60895585 18 + TSS region transcription start site region 77474
Clcn3 8 60910389 to 60983300 72911 - protein coding gene chloride channel, voltage-sensitive 3
Gm18394 8 60935642 to 60936200 558 + pseudogene predicted gene, 18394
Tssr81364 8 60941400 to 60941417 17 - TSS region transcription start site region 81364
Tssr81365 8 60951915 to 60951918 3 - TSS region transcription start site region 81365
Tssr81366 8 60954726 to 60954790 64 - TSS region transcription start site region 81366
Tssr81367 8 60954792 to 60954803 11 - TSS region transcription start site region 81367
Tssr81368 8 60954868 to 60954877 9 - TSS region transcription start site region 81368
9030622M22Rik 8 60963038 to 60965021 1983 unclassified gene RIKEN cDNA 9030622M22 gene
Tssr81369 8 60965440 to 60965470 30 - TSS region transcription start site region 81369
Cpgi20373 8 60982646 to 60983929 1283 CpG island CpG island 20373
Tssr81370 8 60983215 to 60983319 104 - TSS region transcription start site region 81370
B230317F23Rik 8 60983437 to 60985908 2471 + lincRNA gene RIKEN cDNA B230317F23 gene
Cpgi20374 8 60992725 to 60993818 1093 CpG island CpG island 20374
Tssr77475 8 60993189 to 60993247 58 + TSS region transcription start site region 77475
Nek1 8 60993195 to 61131346 138151 + protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 1
Tssr77476 8 60993553 to 60993568 15 + TSS region transcription start site region 77476
Gm45484 8 61024131 to 61025271 1140 + unclassified gene predicted gene 45484
Gm45809 8 61050049 to 61053942 3893 + unclassified gene predicted gene 45809
Gm45483 8 61075365 to 61077046 1681 + unclassified gene predicted gene 45483
D8Ertd124e 8 61091165 to 61091379 214 DNA segment DNA segment, Chr 8, ERATO Doi 124, expressed
Gm16179 8 61112130 to 61112502 372 - pseudogene predicted gene 16179
Gm16178 8 61117605 to 61194648 77043 - antisense lncRNA gene predicted gene 16178
Tssr2576 8 61130535 to 61130539 4 + TSS region transcription start site region 2576