Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:58890661-60760681

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Galntl6 8 57774052 to 58912640 1138588 - protein coding gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
BC030500 8 58911755 to 58914298 2543 + protein coding gene cDNA sequence BC030500
Tssr81356 8 58911831 to 58911848 17 - TSS region transcription start site region 81356
Cpgi20368 8 58912199 to 58913289 1090 CpG island CpG island 20368
Tssr81357 8 58912305 to 58912337 32 - TSS region transcription start site region 81357
Tssr81358 8 58913272 to 58913286 14 - TSS region transcription start site region 81358
Tssr77441 8 58913696 to 58913704 8 + TSS region transcription start site region 77441
Gm7499 8 59092611 to 59093423 812 - pseudogene predicted gene 7499
Gm5740 8 59219317 to 59221173 1856 + pseudogene predicted gene 5740
Tssr77442 8 59419383 to 59419388 5 + TSS region transcription start site region 77442
Gm34370 8 59419445 to 59449647 30202 + lincRNA gene predicted gene, 34370
Gm34420 8 59458540 to 59478458 19918 - lncRNA gene predicted gene, 34420
D8Mit144 8 59490990 to 59491137 147 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 144
D8Dcr24 8 59495141 to 59495252 111 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 24
Gm24847 8 59559315 to 59559422 107 + snRNA gene predicted gene, 24847
D8Mit129 8 59818546 to 59818656 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 129
4930470O06Rik 8 59825649 to 59844721 19072 + lincRNA gene RIKEN cDNA 4930470O06 gene
Tssr77443 8 59825661 to 59825681 20 + TSS region transcription start site region 77443
Gm26164 8 60079590 to 60079693 103 + snRNA gene predicted gene, 26164
Gm34623 8 60195838 to 60280351 84513 + lincRNA gene predicted gene, 34623
Tssr77444 8 60195838 to 60195851 13 + TSS region transcription start site region 77444
Tssr77445 8 60195883 to 60195891 8 + TSS region transcription start site region 77445
Gm19230 8 60262262 to 60265885 3623 - pseudogene predicted gene, 19230
Tssr81359 8 60329546 to 60329549 3 - TSS region transcription start site region 81359
Gm10283 8 60430024 to 60503198 73174 - protein coding gene predicted gene 10283
Tssr81360 8 60452626 to 60452628 2 - TSS region transcription start site region 81360
Tssr81361 8 60503224 to 60503233 9 - TSS region transcription start site region 81361
Cpgi20369 8 60505768 to 60506214 446 CpG island CpG island 20369
Tssr77446 8 60505897 to 60505910 13 + TSS region transcription start site region 77446
Aadat 8 60505932 to 60545677 39745 + protein coding gene aminoadipate aminotransferase
Tssr77447 8 60506109 to 60506125 16 + TSS region transcription start site region 77447
Tssr2573 8 60506177 to 60506184 7 + TSS region transcription start site region 2573
Tssr77448 8 60508724 to 60508728 4 + TSS region transcription start site region 77448
Tssr77449 8 60516014 to 60516041 27 + TSS region transcription start site region 77449
Tssr81362 8 60516056 to 60516082 26 - TSS region transcription start site region 81362
Tssr77450 8 60518238 to 60518242 4 + TSS region transcription start site region 77450
Tssr2574 8 60522452 to 60522470 18 + TSS region transcription start site region 2574
Tssr77451 8 60522684 to 60522709 25 + TSS region transcription start site region 77451
Tssr77452 8 60524205 to 60524212 7 + TSS region transcription start site region 77452
Tssr2575 8 60524235 to 60524241 6 + TSS region transcription start site region 2575
Tssr77453 8 60524318 to 60524324 6 + TSS region transcription start site region 77453
Gm34730 8 60618788 to 60631885 13097 - bidirectional promoter lncRNA gene predicted gene, 34730
Cpgi20370 8 60632281 to 60633636 1355 CpG island CpG island 20370
Tssr77454 8 60632806 to 60632815 9 + TSS region transcription start site region 77454
Tssr77455 8 60632818 to 60632836 18 + TSS region transcription start site region 77455
Mfap3l 8 60632827 to 60676729 43902 + protein coding gene microfibrillar-associated protein 3-like
Tssr77456 8 60632856 to 60632905 49 + TSS region transcription start site region 77456
Cpgi20371 8 60640041 to 60640294 253 CpG island CpG island 20371
Tssr77457 8 60640379 to 60640389 10 + TSS region transcription start site region 77457
Tssr77458 8 60640853 to 60640873 20 + TSS region transcription start site region 77458
Tssr77459 8 60655500 to 60655522 22 + TSS region transcription start site region 77459
Tssr77460 8 60655545 to 60655562 17 + TSS region transcription start site region 77460
Tssr77461 8 60671573 to 60671585 12 + TSS region transcription start site region 77461
Tssr77462 8 60673360 to 60673366 6 + TSS region transcription start site region 77462
Tssr77463 8 60674354 to 60674376 22 + TSS region transcription start site region 77463
Tssr77464 8 60674500 to 60674513 13 + TSS region transcription start site region 77464
Tssr77465 8 60674546 to 60674557 11 + TSS region transcription start site region 77465
Tssr77466 8 60674571 to 60674583 12 + TSS region transcription start site region 77466
Gm45650 8 60719291 to 60725806 6515 + lincRNA gene predicted gene 45650
Gm45651 8 60757119 to 60757453 334 + pseudogene predicted gene 45651