Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:58212611-59973423

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Galntl6 8 57774052 to 58912640 1138588 - protein coding gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
Gm26905 8 58171435 to 58298866 127431 + lincRNA gene predicted gene, 26905
Gm45635 8 58246587 to 58248720 2133 + unclassified gene predicted gene 45635
D8Mit260 8 58254236 to 58254332 96 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 260
Tssr81353 8 58257815 to 58257826 11 - TSS region transcription start site region 81353
Tssr77440 8 58523276 to 58523314 38 + TSS region transcription start site region 77440
Gm15882 8 58523294 to 58524326 1032 + antisense lncRNA gene predicted gene 15882
Gm45634 8 58602605 to 58604594 1989 - unclassified gene predicted gene 45634
D8Dcr23 8 58603059 to 58603161 102 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 23
Gm45636 8 58662429 to 58663492 1063 - unclassified gene predicted gene 45636
D8Mit231 8 58682433 to 58682569 136 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 231
Gm15881 8 58699846 to 58700787 941 - pseudogene predicted gene 15881
Tssr81354 8 58700981 to 58701000 19 - TSS region transcription start site region 81354
Tssr81355 8 58701003 to 58701024 21 - TSS region transcription start site region 81355
BC030500 8 58911755 to 58914298 2543 + protein coding gene cDNA sequence BC030500
Tssr81356 8 58911831 to 58911848 17 - TSS region transcription start site region 81356
Cpgi20368 8 58912199 to 58913289 1090 CpG island CpG island 20368
Tssr81357 8 58912305 to 58912337 32 - TSS region transcription start site region 81357
Tssr81358 8 58913272 to 58913286 14 - TSS region transcription start site region 81358
Tssr77441 8 58913696 to 58913704 8 + TSS region transcription start site region 77441
Gm7499 8 59092611 to 59093423 812 - pseudogene predicted gene 7499
Gm5740 8 59219317 to 59221173 1856 + pseudogene predicted gene 5740
Tssr77442 8 59419383 to 59419388 5 + TSS region transcription start site region 77442
Gm34370 8 59419445 to 59449647 30202 + lincRNA gene predicted gene, 34370
Gm34420 8 59458540 to 59478458 19918 - lncRNA gene predicted gene, 34420
D8Mit144 8 59490990 to 59491137 147 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 144
D8Dcr24 8 59495141 to 59495252 111 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 24
Gm24847 8 59559315 to 59559422 107 + snRNA gene predicted gene, 24847
D8Mit129 8 59818546 to 59818656 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 129
4930470O06Rik 8 59825649 to 59844721 19072 + lincRNA gene RIKEN cDNA 4930470O06 gene
Tssr77443 8 59825661 to 59825681 20 + TSS region transcription start site region 77443