Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:57462801-57512871

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scrg1 8 57455923 to 57477585 21662 + protein coding gene scrapie responsive gene 1
Sap30 8 57482707 to 57487860 5153 - protein coding gene sin3 associated polypeptide
Cpgi20363 8 57486688 to 57488675 1987 CpG island CpG island 20363
Tssr81335 8 57487563 to 57487578 15 - TSS region transcription start site region 81335
Tssr81336 8 57487590 to 57487605 15 - TSS region transcription start site region 81336
Tssr81337 8 57487691 to 57487700 9 - TSS region transcription start site region 81337
Tssr81338 8 57487736 to 57487795 59 - TSS region transcription start site region 81338
Tssr81339 8 57487801 to 57487871 70 - TSS region transcription start site region 81339
Tssr77427 8 57488034 to 57488052 18 + TSS region transcription start site region 77427
Tssr77428 8 57488053 to 57488065 12 + TSS region transcription start site region 77428
2500002B13Rik 8 57488054 to 57508877 20823 + lncRNA gene RIKEN cDNA 2500002B13 gene
Tssr77429 8 57488066 to 57488097 31 + TSS region transcription start site region 77429
Tssr77430 8 57489617 to 57489631 14 + TSS region transcription start site region 77430
Tssr77431 8 57490317 to 57490328 11 + TSS region transcription start site region 77431
Tssr77432 8 57490331 to 57490359 28 + TSS region transcription start site region 77432
Cpgi20364 8 57510973 to 57512927 1954 CpG island CpG island 20364
Tssr81340 8 57511513 to 57511532 19 - TSS region transcription start site region 81340
Tssr77433 8 57511833 to 57511869 36 + TSS region transcription start site region 77433
Tssr2571 8 57511881 to 57511884 3 + TSS region transcription start site region 2571
Tssr77434 8 57511893 to 57511930 37 + TSS region transcription start site region 77434
Hmgb2 8 57511907 to 57515999 4092 + protein coding gene high mobility group box 2
Tssr77435 8 57512521 to 57512567 46 + TSS region transcription start site region 77435
Tssr77436 8 57512845 to 57512894 49 + TSS region transcription start site region 77436