Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:57331581-57562101

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmr10b 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10b
Lmr10c 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10c
Lmr10 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10
Lmr10a 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10a
Gm34030 8 57331692 to 57334585 2893 - lincRNA gene predicted gene, 34030
Tssr77414 8 57332111 to 57332131 20 + TSS region transcription start site region 77414
Tssr77415 8 57332425 to 57332455 30 + TSS region transcription start site region 77415
5033428I22Rik 8 57332435 to 57354580 22145 + lincRNA gene RIKEN cDNA 5033428I22 gene
Tssr81333 8 57332829 to 57332891 62 - TSS region transcription start site region 81333
Cpgi20360 8 57333859 to 57334506 647 CpG island CpG island 20360
Cpgi20361 8 57340839 to 57341436 597 CpG island CpG island 20361
Tssr77416 8 57340970 to 57340990 20 + TSS region transcription start site region 77416
D8Mit54 8 57344354 to 57344598 244 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 54
Cpgi20362 8 57353556 to 57354223 667 CpG island CpG island 20362
Gm34099 8 57403117 to 57415049 11932 + lincRNA gene predicted gene, 34099
Tssr81334 8 57432784 to 57432791 7 - TSS region transcription start site region 81334
Tssr77417 8 57436373 to 57436388 15 + TSS region transcription start site region 77417
Tssr77418 8 57436394 to 57436414 20 + TSS region transcription start site region 77418
Tssr77419 8 57436432 to 57436446 14 + TSS region transcription start site region 77419
Tssr77420 8 57436457 to 57436462 5 + TSS region transcription start site region 77420
Tssr77421 8 57436485 to 57436490 5 + TSS region transcription start site region 77421
Gm18136 8 57446581 to 57447101 520 - pseudogene predicted gene, 18136
Tssr77422 8 57455898 to 57455904 6 + TSS region transcription start site region 77422
Scrg1 8 57455923 to 57477585 21662 + protein coding gene scrapie responsive gene 1
Tssr77423 8 57455977 to 57455997 20 + TSS region transcription start site region 77423
Tssr77424 8 57456002 to 57456018 16 + TSS region transcription start site region 77424
Tssr77425 8 57456020 to 57456036 16 + TSS region transcription start site region 77425
Tssr77426 8 57456040 to 57456084 44 + TSS region transcription start site region 77426
Sap30 8 57482707 to 57487860 5153 - protein coding gene sin3 associated polypeptide
Cpgi20363 8 57486688 to 57488675 1987 CpG island CpG island 20363
Tssr81335 8 57487563 to 57487578 15 - TSS region transcription start site region 81335
Tssr81336 8 57487590 to 57487605 15 - TSS region transcription start site region 81336
Tssr81337 8 57487691 to 57487700 9 - TSS region transcription start site region 81337
Tssr81338 8 57487736 to 57487795 59 - TSS region transcription start site region 81338
Tssr81339 8 57487801 to 57487871 70 - TSS region transcription start site region 81339
Tssr77427 8 57488034 to 57488052 18 + TSS region transcription start site region 77427
Tssr77428 8 57488053 to 57488065 12 + TSS region transcription start site region 77428
2500002B13Rik 8 57488054 to 57508877 20823 + lncRNA gene RIKEN cDNA 2500002B13 gene
Tssr77429 8 57488066 to 57488097 31 + TSS region transcription start site region 77429
Tssr77430 8 57489617 to 57489631 14 + TSS region transcription start site region 77430
Tssr77431 8 57490317 to 57490328 11 + TSS region transcription start site region 77431
Tssr77432 8 57490331 to 57490359 28 + TSS region transcription start site region 77432
Cpgi20364 8 57510973 to 57512927 1954 CpG island CpG island 20364
Tssr81340 8 57511513 to 57511532 19 - TSS region transcription start site region 81340
Tssr77433 8 57511833 to 57511869 36 + TSS region transcription start site region 77433
Tssr2571 8 57511881 to 57511884 3 + TSS region transcription start site region 2571
Tssr77434 8 57511893 to 57511930 37 + TSS region transcription start site region 77434
Hmgb2 8 57511907 to 57515999 4092 + protein coding gene high mobility group box 2
Tssr77435 8 57512521 to 57512567 46 + TSS region transcription start site region 77435
Tssr77436 8 57512845 to 57512894 49 + TSS region transcription start site region 77436
Gm6012 8 57520157 to 57520886 729 - pseudogene predicted gene 6012
Galnt7 8 57523828 to 57653032 129204 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 7
Tssr81341 8 57529110 to 57529130 20 - TSS region transcription start site region 81341
Tssr81342 8 57529139 to 57529148 9 - TSS region transcription start site region 81342
Gm25379 8 57549775 to 57549888 113 + snoRNA gene predicted gene, 25379
Gm10284 8 57550299 to 57551303 1004 + pseudogene predicted pseudogene 10284