Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:56570966-57411105

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmr10c 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10c
Lmr10 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10
Lmr10a 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10a
Lmr10b 8 34853943 to 57344598 22490655 QTL leishmaniasis resistance 10b
Fbxo8 8 56551134 to 56593939 42805 + protein coding gene F-box protein 8
Tssr77407 8 56617485 to 56617497 12 + TSS region transcription start site region 77407
Tssr81318 8 56625185 to 56625191 6 - TSS region transcription start site region 81318
D8Mit100 8 56660799 to 56660907 108 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 100
D8Mit69 8 56699102 to 56699245 143 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 69
Gm6503 8 56713117 to 56715270 2153 + pseudogene predicted gene 6503
Gm33501 8 56872114 to 56888803 16689 - lincRNA gene predicted gene, 33501
Tssr77408 8 56877237 to 56877239 2 + TSS region transcription start site region 77408
Gm7328 8 56952829 to 56955053 2224 + pseudogene predicted gene 7328
D8Mit68 8 56990966 to 56991105 139 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 68
Gm17994 8 57291522 to 57292040 518 - pseudogene predicted gene, 17994
Hand2os1 8 57304414 to 57320859 16445 - antisense lncRNA gene Hand2, opposite strand 1
Tssr81319 8 57305422 to 57305427 5 - TSS region transcription start site region 81319
Tssr81320 8 57306413 to 57306444 31 - TSS region transcription start site region 81320
Tssr81321 8 57310267 to 57310277 10 - TSS region transcription start site region 81321
Tssr81322 8 57310382 to 57310393 11 - TSS region transcription start site region 81322
Cpgi20356 8 57312713 to 57313258 545 CpG island CpG island 20356
Tssr81323 8 57314620 to 57314623 3 - TSS region transcription start site region 81323
Cpgi20357 8 57320009 to 57320225 216 CpG island CpG island 20357
Tssr81324 8 57320306 to 57320318 12 - TSS region transcription start site region 81324
Tssr81325 8 57320346 to 57320359 13 - TSS region transcription start site region 81325
Tssr81326 8 57320366 to 57320379 13 - TSS region transcription start site region 81326
Tssr81327 8 57320386 to 57320399 13 - TSS region transcription start site region 81327
Tssr81328 8 57320402 to 57320421 19 - TSS region transcription start site region 81328
Tssr81329 8 57320431 to 57320471 40 - TSS region transcription start site region 81329
Tssr81330 8 57320736 to 57320769 33 - TSS region transcription start site region 81330
Cpgi20358 8 57320840 to 57322650 1810 CpG island CpG island 20358
Tssr81331 8 57320843 to 57320871 28 - TSS region transcription start site region 81331
Tssr77409 8 57320975 to 57320992 17 + TSS region transcription start site region 77409
Hand2 8 57320983 to 57324517 3534 + protein coding gene heart and neural crest derivatives expressed 2
Tssr77410 8 57321001 to 57321013 12 + TSS region transcription start site region 77410
Tssr77411 8 57322194 to 57322257 63 + TSS region transcription start site region 77411
Tssr81332 8 57323033 to 57323040 7 - TSS region transcription start site region 81332
Tssr77412 8 57323313 to 57323324 11 + TSS region transcription start site region 77412
Tssr77413 8 57323326 to 57323335 9 + TSS region transcription start site region 77413
Cpgi20359 8 57328270 to 57328977 707 CpG island CpG island 20359
Gm34030 8 57331692 to 57334585 2893 - lincRNA gene predicted gene, 34030
Tssr77414 8 57332111 to 57332131 20 + TSS region transcription start site region 77414
Tssr77415 8 57332425 to 57332455 30 + TSS region transcription start site region 77415
5033428I22Rik 8 57332435 to 57354580 22145 + lincRNA gene RIKEN cDNA 5033428I22 gene
Tssr81333 8 57332829 to 57332891 62 - TSS region transcription start site region 81333
Cpgi20360 8 57333859 to 57334506 647 CpG island CpG island 20360
Cpgi20361 8 57340839 to 57341436 597 CpG island CpG island 20361
Tssr77416 8 57340970 to 57340990 20 + TSS region transcription start site region 77416
D8Mit54 8 57344354 to 57344598 244 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 54
Cpgi20362 8 57353556 to 57354223 667 CpG island CpG island 20362
Gm34099 8 57403117 to 57415049 11932 + lincRNA gene predicted gene, 34099