Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:55978421-56598423

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Glra3 8 55940411 to 56125352 184941 + protein coding gene glycine receptor, alpha 3 subunit
Gm45366 8 56016717 to 56017100 383 - pseudogene predicted gene 45366
9330109K16Rik 8 56129640 to 56130073 433 unclassified gene RIKEN cDNA 9330109K16 gene
Tssr77399 8 56183297 to 56183304 7 + TSS region transcription start site region 77399
Tssr81315 8 56229155 to 56229162 7 - TSS region transcription start site region 81315
Tssr2569 8 56288421 to 56288423 2 + TSS region transcription start site region 2569
D8Dcr21 8 56291758 to 56291857 99 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 21
Cpgi20354 8 56294418 to 56294866 448 CpG island CpG island 20354
Tssr77400 8 56294578 to 56294592 14 + TSS region transcription start site region 77400
Hpgd 8 56294585 to 56321043 26458 + protein coding gene hydroxyprostaglandin dehydrogenase 15 (NAD)
Tssr77401 8 56297417 to 56297421 4 + TSS region transcription start site region 77401
Tssr77402 8 56305703 to 56305705 2 + TSS region transcription start site region 77402
Gm45540 8 56311304 to 56314909 3605 + unclassified gene predicted gene 45540
Tssr77403 8 56320050 to 56320060 10 + TSS region transcription start site region 77403
Tssr2570 8 56344696 to 56344697 1 + TSS region transcription start site region 2570
Gm7419 8 56453515 to 56454438 923 + pseudogene predicted gene 7419
D8Mit299 8 56464911 to 56465024 113 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 299
4930518J21Rik 8 56465622 to 56484968 19346 - lincRNA gene RIKEN cDNA 4930518J21 gene
Tssr81316 8 56474416 to 56474425 9 - TSS region transcription start site region 81316
Gm24375 8 56521372 to 56521503 131 - snoRNA gene predicted gene, 24375
Cep44 8 56531516 to 56550874 19358 - protein coding gene centrosomal protein 44
Cpgi20355 8 56550529 to 56551863 1334 CpG island CpG island 20355
Tssr81317 8 56550791 to 56550881 90 - TSS region transcription start site region 81317
Tssr77404 8 56551103 to 56551143 40 + TSS region transcription start site region 77404
Fbxo8 8 56551134 to 56593939 42805 + protein coding gene F-box protein 8
Tssr77405 8 56551145 to 56551161 16 + TSS region transcription start site region 77405
Tssr77406 8 56551166 to 56551177 11 + TSS region transcription start site region 77406
Gm2767 8 56560916 to 56561388 472 + pseudogene predicted gene 2767
Gm25992 8 56561301 to 56561409 108 + miRNA gene predicted gene, 25992