Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:54644837-55264854

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wdr17 8 54629611 to 54724518 94907 - protein coding gene WD repeat domain 17
Gm15758 8 54708987 to 54710381 1394 + unclassified non-coding RNA gene predicted gene 15758
Tssr81310 8 54718664 to 54718689 25 - TSS region transcription start site region 81310
Cpgi20352 8 54724187 to 54724571 384 CpG island CpG island 20352
Tssr81311 8 54724317 to 54724373 56 - TSS region transcription start site region 81311
Tssr81312 8 54724474 to 54724494 20 - TSS region transcription start site region 81312
Tssr77377 8 54779522 to 54779583 61 + TSS region transcription start site region 77377
Tssr77378 8 54779590 to 54779610 20 + TSS region transcription start site region 77378
n-R5s98 8 54866261 to 54866379 118 + rRNA gene nuclear encoded rRNA 5S 98
Tssr81313 8 54886964 to 54886999 35 - TSS region transcription start site region 81313
D8Mit246 8 54895810 to 54895935 125 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 246
Tssr77379 8 54954809 to 54954820 11 + TSS region transcription start site region 77379
Tssr77380 8 54954837 to 54954854 17 + TSS region transcription start site region 77380
Gpm6a 8 54954843 to 55060871 106028 + protein coding gene glycoprotein m6a
Tssr77381 8 54954856 to 54954872 16 + TSS region transcription start site region 77381
Tssr77382 8 54954891 to 54954927 36 + TSS region transcription start site region 77382
Tssr77383 8 54954934 to 54954949 15 + TSS region transcription start site region 77383
Tssr77384 8 54954969 to 54954974 5 + TSS region transcription start site region 77384
Tssr77385 8 54954994 to 54955010 16 + TSS region transcription start site region 77385
Tssr77386 8 54955023 to 54955024 1 + TSS region transcription start site region 77386
Tssr77387 8 54955026 to 54955037 11 + TSS region transcription start site region 77387
Tssr77388 8 54955093 to 54955117 24 + TSS region transcription start site region 77388
Tssr77389 8 54955140 to 54955183 43 + TSS region transcription start site region 77389
Tssr77390 8 54955201 to 54955212 11 + TSS region transcription start site region 77390
Tssr77391 8 54955213 to 54955231 18 + TSS region transcription start site region 77391
Tssr77392 8 54955246 to 54955280 34 + TSS region transcription start site region 77392
Gm45263 8 54959819 to 54961193 1374 + unclassified gene predicted gene 45263
Tssr77393 8 54978893 to 54978905 12 + TSS region transcription start site region 77393
Tssr77394 8 54985950 to 54985956 6 + TSS region transcription start site region 77394
Gm45265 8 55005285 to 55007781 2496 + unclassified gene predicted gene 45265
Gm45264 8 55028401 to 55032395 3994 + unclassified gene predicted gene 45264
Gm45262 8 55043059 to 55044521 1462 + unclassified gene predicted gene 45262
A230085B16Rik 8 55055874 to 55057729 1855 + unclassified non-coding RNA gene RIKEN cDNA A230085B16 gene
Tssr77395 8 55059109 to 55059124 15 + TSS region transcription start site region 77395
Tssr77396 8 55059152 to 55059164 12 + TSS region transcription start site region 77396
Tssr2567 8 55059222 to 55059241 19 + TSS region transcription start site region 2567
9330121K16Rik 8 55073249 to 55077134 3885 + unclassified gene RIKEN cDNA 9330121K16 gene
Gm8734 8 55080404 to 55081715 1311 - pseudogene predicted gene 8734