Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:54540774-54660804

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr77369 8 54550324 to 54550339 15 + TSS region transcription start site region 77369
Asb5 8 54550331 to 54587842 37511 + protein coding gene ankyrin repeat and SOCs box-containing 5
Tssr77370 8 54550384 to 54550397 13 + TSS region transcription start site region 77370
Tssr77371 8 54550423 to 54550439 16 + TSS region transcription start site region 77371
Tssr77372 8 54565867 to 54565886 19 + TSS region transcription start site region 77372
5330439A09Rik 8 54568550 to 54582512 13962 - antisense lncRNA gene RIKEN cDNA 5330439A09 gene
Tssr77373 8 54571430 to 54571469 39 + TSS region transcription start site region 77373
Tssr77374 8 54582629 to 54582632 3 + TSS region transcription start site region 77374
Gm46039 8 54596123 to 54599395 3272 + lncRNA gene predicted gene, 46039
D8Dcr20 8 54597803 to 54597898 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 20
Cpgi20351 8 54600717 to 54600977 260 CpG island CpG island 20351
Tssr77375 8 54600774 to 54600804 30 + TSS region transcription start site region 77375
Spata4 8 54600781 to 54610098 9317 + protein coding gene spermatogenesis associated 4
Tssr77376 8 54600815 to 54600826 11 + TSS region transcription start site region 77376
Wdr17 8 54629611 to 54724518 94907 - protein coding gene WD repeat domain 17
Tssr81309 8 54644696 to 54644702 6 - TSS region transcription start site region 81309