Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:53411727-53623421

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm45554	8	53436100 to 53480650	44550	+	lincRNA gene	predicted gene 45554
Gm39179	8	53436263 to 53446491	10228	+	lncRNA gene	predicted gene, 39179
Tssr81295	8	53446879 to 53446891	12	-	TSS region	transcription start site region 81295
Gm39180	8	53478190 to 53480388	2198	+	lncRNA gene	predicted gene, 39180
Gm27964	8	53493763 to 53493824	61	+	snRNA gene	predicted gene, 27964
Gm22841	8	53493853 to 53493914	61	+	snRNA gene	predicted gene, 22841
Cpgi20347	8	53511635 to 53512029	394		CpG island	CpG island 20347
Tssr77357	8	53511695 to 53511739	44	+	TSS region	transcription start site region 77357
Aga	8	53511727 to 53523421	11694	+	protein coding gene	aspartylglucosaminidase
Tssr77358	8	53511774 to 53511808	34	+	TSS region	transcription start site region 77358
Tssr77359	8	53511815 to 53511838	23	+	TSS region	transcription start site region 77359
Gm39181	8	53565595 to 53583539	17944	-	lncRNA gene	predicted gene, 39181
Neil3	8	53586867 to 53639065	52198	-	protein coding gene	nei like 3 (E. coli)
Tssr81296	8	53591599 to 53591610	11	-	TSS region	transcription start site region 81296
Tssr81297	8	53601823 to 53601826	3	-	TSS region	transcription start site region 81297
Tssr77360	8	53605198 to 53605209	11	+	TSS region	transcription start site region 77360