Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:52931867-54294065

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D8Mit230 8 53005594 to 53005718 124 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 230
Gm23666 8 53006408 to 53006523 115 + snoRNA gene predicted gene, 23666
D8Dcr19 8 53307705 to 53307808 103 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 19
Gm45554 8 53436100 to 53480650 44550 + lincRNA gene predicted gene 45554
Gm39179 8 53436263 to 53446491 10228 + lncRNA gene predicted gene, 39179
Tssr81295 8 53446879 to 53446891 12 - TSS region transcription start site region 81295
Gm39180 8 53478190 to 53480388 2198 + lncRNA gene predicted gene, 39180
Gm27964 8 53493763 to 53493824 61 + snRNA gene predicted gene, 27964
Gm22841 8 53493853 to 53493914 61 + snRNA gene predicted gene, 22841
Cpgi20347 8 53511635 to 53512029 394 CpG island CpG island 20347
Tssr77357 8 53511695 to 53511739 44 + TSS region transcription start site region 77357
Aga 8 53511727 to 53523421 11694 + protein coding gene aspartylglucosaminidase
Tssr77358 8 53511774 to 53511808 34 + TSS region transcription start site region 77358
Tssr77359 8 53511815 to 53511838 23 + TSS region transcription start site region 77359
Gm39181 8 53565595 to 53583539 17944 - lncRNA gene predicted gene, 39181
Neil3 8 53586867 to 53639065 52198 - protein coding gene nei like 3 (E. coli)
Tssr81296 8 53591599 to 53591610 11 - TSS region transcription start site region 81296
Tssr81297 8 53601823 to 53601826 3 - TSS region transcription start site region 81297
Tssr77360 8 53605198 to 53605209 11 + TSS region transcription start site region 77360
Cpgi20348 8 53638468 to 53639160 692 CpG island CpG island 20348
Tssr81298 8 53638945 to 53639021 76 - TSS region transcription start site region 81298
Gm19921 8 53911739 to 53912441 702 + pseudogene predicted gene, 19921
Gm33153 8 54076070 to 54077773 1703 - protein coding gene predicted gene, 33153
Cpgi20349 8 54076781 to 54078070 1289 CpG island CpG island 20349
Tssr77361 8 54077136 to 54077152 16 + TSS region transcription start site region 77361
Tssr77362 8 54077164 to 54077183 19 + TSS region transcription start site region 77362
Tssr77363 8 54077202 to 54077240 38 + TSS region transcription start site region 77363
Tssr77364 8 54077243 to 54077256 13 + TSS region transcription start site region 77364
Tssr77365 8 54077494 to 54077524 30 + TSS region transcription start site region 77365
Vegfc 8 54077532 to 54186454 108922 + protein coding gene vascular endothelial growth factor C
Tssr81299 8 54078000 to 54078023 23 - TSS region transcription start site region 81299
Tssr77366 8 54106954 to 54106958 4 + TSS region transcription start site region 77366