Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:49206613-51512680

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hk 8 32016544 to 49436343 17419799 heritable phenotypic marker hook
Hbnr12 8 32786988 to 50837502 18050514 QTL Heligmosomoides bakeri nematode resistance 12
Gm45832 8 49230527 to 49231969 1442 - unclassified gene predicted gene 45832
4930555F03Rik 8 49370886 to 49548994 178108 + lincRNA gene RIKEN cDNA 4930555F03 gene
Tssr77351 8 49370917 to 49370922 5 + TSS region transcription start site region 77351
Tssr77352 8 49370928 to 49370955 27 + TSS region transcription start site region 77352
Tssr81284 8 49430628 to 49430632 4 - TSS region transcription start site region 81284
D8Mit6 8 49436178 to 49436343 165 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 6
Gm45577 8 49462453 to 49464739 2286 - unclassified gene predicted gene 45577
Tssr77353 8 49485445 to 49485487 42 + TSS region transcription start site region 77353
Gm45697 8 49485770 to 49488645 2875 - unclassified gene predicted gene 45697
Gm45696 8 49521424 to 49522408 984 + unclassified gene predicted gene 45696
6430514K02Rik 8 49738479 to 49739895 1416 unclassified gene RIKEN cDNA 6430514K02 gene
Gm45321 8 49818937 to 49949006 130069 + lincRNA gene predicted gene 45321
Tssr77354 8 49819099 to 49819113 14 + TSS region transcription start site region 77354
Gm45322 8 49838068 to 49839428 1360 + lincRNA gene predicted gene 45322
D8Ertd268e 8 49951912 to 49952158 246 DNA segment DNA segment, Chr 8, ERATO Doi 268, expressed
Gm45323 8 49959483 to 50013384 53901 - lincRNA gene predicted gene 45323
Gm45324 8 49989907 to 49995544 5637 + unclassified gene predicted gene 45324
Gm45341 8 50117745 to 50517889 400144 - lincRNA gene predicted gene 45341
Gm45455 8 50201613 to 50517680 316067 - lincRNA gene predicted gene 45455
Tssr81285 8 50326838 to 50326842 4 - TSS region transcription start site region 81285
Gm2516 8 50368112 to 50416088 47976 + lincRNA gene predicted gene 2516
Gm45259 8 50389092 to 50390097 1005 + unclassified gene predicted gene 45259
Tssr81286 8 50517647 to 50517665 18 - TSS region transcription start site region 81286
Tssr81287 8 50555980 to 50555983 3 - TSS region transcription start site region 81287
Gm23986 8 50563241 to 50563303 62 + snRNA gene predicted gene, 23986
C130073E24Rik 8 50743291 to 50916997 173706 - lincRNA gene RIKEN cDNA C130073E24 gene
1700019L22Rik 8 50764515 to 50918746 154231 - lncRNA gene RIKEN cDNA 1700019L22 gene
Tssr77355 8 50823792 to 50823796 4 + TSS region transcription start site region 77355
D8Dcr17 8 50837361 to 50837458 97 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 17
D8Mit205 8 50837362 to 50837502 140 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 205
Ltq1 8 50837362 to 50837502 140 QTL lung tumor QTL 1
Trigq2 8 50837362 to 50837502 140 QTL triglyceride QTL 2
Cpgi20346 8 50915317 to 50916731 1414 CpG island CpG island 20346
Tssr81288 8 50916110 to 50916121 11 - TSS region transcription start site region 81288
Tssr81289 8 50916171 to 50916204 33 - TSS region transcription start site region 81289
Tssr81290 8 50916208 to 50916224 16 - TSS region transcription start site region 81290
Gm45386 8 51137630 to 51137847 217 + pseudogene predicted gene 45386
Gm32975 8 51177683 to 51180608 2925 + lincRNA gene predicted gene, 32975
D8Dcr18 8 51234711 to 51234808 97 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 18
Gm8679 8 51275890 to 51276757 867 + pseudogene predicted gene 8679
Tssr77356 8 51375802 to 51375804 2 + TSS region transcription start site region 77356
Gm17911 8 51453395 to 51454158 763 + pseudogene predicted gene, 17911