Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:48714532-49656665

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hk 8 32016544 to 49436343 17419799 heritable phenotypic marker hook
Tenm3 8 48227682 to 48843951 616269 - protein coding gene teneurin transmembrane protein 3
2900073C17Rik 8 48841994 to 48843845 1851 unclassified gene RIKEN cDNA 2900073C17 gene
Cpgi20345 8 48842663 to 48844192 1529 CpG island CpG island 20345
Tssr81279 8 48843264 to 48843320 56 - TSS region transcription start site region 81279
Tssr81280 8 48843360 to 48843379 19 - TSS region transcription start site region 81280
Tssr77350 8 48843517 to 48843528 11 + TSS region transcription start site region 77350
Tssr81281 8 48843662 to 48843684 22 - TSS region transcription start site region 81281
Gm19744 8 48843665 to 48869901 26236 + unclassified non-coding RNA gene predicted gene, 19744
Tssr81282 8 48843804 to 48843827 23 - TSS region transcription start site region 81282
Tssr81283 8 48843880 to 48843894 14 - TSS region transcription start site region 81283
Gm25830 8 48958350 to 48958481 131 - snoRNA gene predicted gene, 25830
Gm45830 8 49044280 to 49046017 1737 + lincRNA gene predicted gene 45830
Gm45829 8 49063879 to 49071859 7980 + lincRNA gene predicted gene 45829
D8Mit99 8 49093791 to 49094000 209 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 99
Hpvc1 8 49184532 to 49186665 2133 protein coding gene human papillomavirus 18 E5 central sequence motif gene 1
D8Mit177 8 49191926 to 49192054 128 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 177
Gm45832 8 49230527 to 49231969 1442 - unclassified gene predicted gene 45832
4930555F03Rik 8 49370886 to 49548994 178108 + lincRNA gene RIKEN cDNA 4930555F03 gene
Tssr77351 8 49370917 to 49370922 5 + TSS region transcription start site region 77351
Tssr77352 8 49370928 to 49370955 27 + TSS region transcription start site region 77352
Tssr81284 8 49430628 to 49430632 4 - TSS region transcription start site region 81284
D8Mit6 8 49436178 to 49436343 165 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 6
Gm45577 8 49462453 to 49464739 2286 - unclassified gene predicted gene 45577
Tssr77353 8 49485445 to 49485487 42 + TSS region transcription start site region 77353
Gm45697 8 49485770 to 49488645 2875 - unclassified gene predicted gene 45697
Gm45696 8 49521424 to 49522408 984 + unclassified gene predicted gene 45696