Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:47842110-48282129

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wwc2 8 47827595 to 47990551 162956 - protein coding gene WW, C2 and coiled-coil domain containing 2
Cpgi20334 8 47847350 to 47847585 235 CpG island CpG island 20334
Tssr77342 8 47853849 to 47853850 1 + TSS region transcription start site region 77342
n-R5s97 8 47899182 to 47899294 112 + rRNA gene nuclear encoded rRNA 5S 97
Tssr81258 8 47941558 to 47941562 4 - TSS region transcription start site region 81258
Gm39173 8 47943096 to 47952674 9578 - lncRNA gene predicted gene, 39173
Tssr81259 8 47948359 to 47948373 14 - TSS region transcription start site region 81259
Tssr81260 8 47948385 to 47948407 22 - TSS region transcription start site region 81260
Gm31984 8 47971635 to 47975581 3946 - lncRNA gene predicted gene, 31984
Tssr81261 8 47974307 to 47974309 2 - TSS region transcription start site region 81261
Cpgi20335 8 47974866 to 47975028 162 CpG island CpG island 20335
Cpgi20336 8 47989481 to 47991409 1928 CpG island CpG island 20336
Tssr81262 8 47990361 to 47990400 39 - TSS region transcription start site region 81262
Tssr81263 8 47990490 to 47990534 44 - TSS region transcription start site region 81263
Tssr81264 8 47990535 to 47990577 42 - TSS region transcription start site region 81264
D8Dcr16 8 47993970 to 47994065 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 16
Gm32052 8 48002239 to 48009157 6918 - lincRNA gene predicted gene, 32052
Tssr81265 8 48009071 to 48009114 43 - TSS region transcription start site region 81265
D8Mit66 8 48058270 to 48058418 148 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 66
Tssr77343 8 48062110 to 48062129 19 + TSS region transcription start site region 77343
Gm2607 8 48070002 to 48070628 626 - pseudogene predicted gene 2607
Tssr81266 8 48070734 to 48070735 1 - TSS region transcription start site region 81266
Cpgi20337 8 48097452 to 48097775 323 CpG island CpG island 20337
Dctd 8 48099092 to 48141667 42575 + protein coding gene dCMP deaminase
Cpgi20338 8 48109837 to 48110752 915 CpG island CpG island 20338
Tssr77344 8 48109949 to 48110002 53 + TSS region transcription start site region 77344
Tssr77345 8 48110003 to 48110023 20 + TSS region transcription start site region 77345
Tssr77346 8 48110156 to 48110194 38 + TSS region transcription start site region 77346
Tssr77347 8 48136131 to 48136168 37 + TSS region transcription start site region 77347
Gm39174 8 48144215 to 48154388 10173 + lncRNA gene predicted gene, 39174
Gm32194 8 48206587 to 48218650 12063 + lncRNA gene predicted gene, 32194
Gm32923 8 48220031 to 48225571 5540 + lncRNA gene predicted gene, 32923
Cpgi20339 8 48222273 to 48222595 322 CpG island CpG island 20339
Tenm3 8 48227682 to 48843951 616269 - protein coding gene teneurin transmembrane protein 3
Cpgi20340 8 48228338 to 48229274 936 CpG island CpG island 20340
Gm32842 8 48270248 to 48270985 737 - pseudogene predicted gene, 32842