MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:47717143-47927805

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-R5s96	8	47719246 to 47719369	123	+	rRNA gene	nuclear encoded rRNA 5S 96
Gm31786	8	47744712 to 47750134	5422	-	lincRNA gene	predicted gene, 31786
Tssr81254	8	47750133 to 47750140	7	-	TSS region	transcription start site region 81254
Tssr81255	8	47750156 to 47750197	41	-	TSS region	transcription start site region 81255
Gm45824	8	47764054 to 47766125	2071	-	lincRNA gene	predicted gene 45824
Gm45864	8	47773555 to 47777802	4247	+	lincRNA gene	predicted gene 45864
Tssr77338	8	47788842 to 47788848	6	+	TSS region	transcription start site region 77338
1700061N14Rik	8	47811724 to 47818221	6497	-	lincRNA gene	RIKEN cDNA 1700061N14 gene
Tssr81256	8	47818179 to 47818184	5	-	TSS region	transcription start site region 81256
Tssr81257	8	47818199 to 47818225	26	-	TSS region	transcription start site region 81257
Cldn24	8	47822143 to 47822805	662	+	protein coding gene	claudin 24
Tssr77339	8	47824459 to 47824471	12	+	TSS region	transcription start site region 77339
Cldn22	8	47824482 to 47825475	993	+	protein coding gene	claudin 22
Tssr77340	8	47824530 to 47824542	12	+	TSS region	transcription start site region 77340
Wwc2	8	47827595 to 47990551	162956	-	protein coding gene	WW, C2 and coiled-coil domain containing 2
Tssr77341	8	47836927 to 47836929	2	+	TSS region	transcription start site region 77341
Cpgi20334	8	47847350 to 47847585	235		CpG island	CpG island 20334
Tssr77342	8	47853849 to 47853850	1	+	TSS region	transcription start site region 77342
n-R5s97	8	47899182 to 47899294	112	+	rRNA gene	nuclear encoded rRNA 5S 97