Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:47383422-47683436

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stox2 8 47180048 to 47412459 232411 - protein coding gene storkhead box 2
4930448N21Rik 8 47294271 to 47446361 152090 unclassified gene RIKEN cDNA 4930448N21 gene
Cpgi20327 8 47392420 to 47392580 160 CpG island CpG island 20327
Cpgi20328 8 47412357 to 47414093 1736 CpG island CpG island 20328
Gm10083 8 47412408 to 47414164 1756 + protein coding gene predicted gene 10083
Tssr81233 8 47413646 to 47413686 40 - TSS region transcription start site region 81233
Tssr81234 8 47413779 to 47413826 47 - TSS region transcription start site region 81234
Tssr81235 8 47413833 to 47413855 22 - TSS region transcription start site region 81235
Tssr2564 8 47425613 to 47425615 2 + TSS region transcription start site region 2564
Gm22857 8 47440418 to 47440551 133 + snoRNA gene predicted gene, 22857
Trappc11 8 47490128 to 47533470 43342 - protein coding gene trafficking protein particle complex 11
Cpgi20329 8 47533080 to 47534254 1174 CpG island CpG island 20329
Tssr81236 8 47533405 to 47533412 7 - TSS region transcription start site region 81236
Tssr81237 8 47533422 to 47533436 14 - TSS region transcription start site region 81237
Tssr81238 8 47533439 to 47533477 38 - TSS region transcription start site region 81238
Tssr77336 8 47533639 to 47533709 70 + TSS region transcription start site region 77336
Rwdd4a 8 47533645 to 47552837 19192 + protein coding gene RWD domain containing 4A
Gm45576 8 47557529 to 47567896 10367 + lincRNA gene predicted gene 45576
Gm27409 8 47591668 to 47591747 79 + miRNA gene predicted gene, 27409
Gm39172 8 47594821 to 47595550 729 + lncRNA gene predicted gene, 39172
Gm45575 8 47627553 to 47628100 547 - pseudogene predicted gene 45575
Gm8623 8 47632329 to 47632764 435 - pseudogene predicted gene 8623
Tssr81239 8 47632810 to 47632820 10 - TSS region transcription start site region 81239
Cpgi20330 8 47646679 to 47647240 561 CpG island CpG island 20330
Ing2 8 47667178 to 47675159 7981 - protein coding gene inhibitor of growth family, member 2
Cpgi20331 8 47673467 to 47676295 2828 CpG island CpG island 20331
Tssr81240 8 47673472 to 47673483 11 - TSS region transcription start site region 81240
Tssr2565 8 47674824 to 47674833 9 - TSS region transcription start site region 2565
Tssr81241 8 47674835 to 47674868 33 - TSS region transcription start site region 81241
Tssr81242 8 47675112 to 47675126 14 - TSS region transcription start site region 81242
Tssr81243 8 47675130 to 47675165 35 - TSS region transcription start site region 81243
Tssr81244 8 47675179 to 47675190 11 - TSS region transcription start site region 81244
Tssr77337 8 47675362 to 47675413 51 + TSS region transcription start site region 77337
AA386476 8 47675391 to 47685239 9848 + bidirectional promoter lncRNA gene expressed sequence AA386476
Tssr81245 8 47675588 to 47675617 29 - TSS region transcription start site region 81245
Gm31692 8 47681281 to 47695396 14115 - lncRNA gene predicted gene, 31692