Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:46904807-47284816

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr77326 8 46921854 to 46921880 26 + TSS region transcription start site region 77326
Tssr77327 8 46934477 to 46934514 37 + TSS region transcription start site region 77327
Tssr81218 8 46941285 to 46941321 36 - TSS region transcription start site region 81218
1700011L03Rik 8 46946795 to 46948799 2004 - lincRNA gene RIKEN cDNA 1700011L03 gene
Cpgi20323 8 46965909 to 46966103 194 CpG island CpG island 20323
Tssr77328 8 46986883 to 46986891 8 + TSS region transcription start site region 77328
Enpp6 8 46986887 to 47096762 109875 + protein coding gene ectonucleotide pyrophosphatase/phosphodiesterase 6
Tssr77329 8 46986898 to 46986910 12 + TSS region transcription start site region 77329
Tssr77330 8 46986913 to 46986962 49 + TSS region transcription start site region 77330
Gm45600 8 46994795 to 47014177 19382 - antisense lncRNA gene predicted gene 45600
D8Dcr15 8 46999407 to 46999502 95 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 15
4930579M01Rik 8 47026805 to 47038177 11372 - antisense lncRNA gene RIKEN cDNA 4930579M01 gene
Gm31231 8 47075018 to 47082406 7388 - lncRNA gene predicted gene, 31231
Tssr77331 8 47093757 to 47093761 4 + TSS region transcription start site region 77331
Tssr77332 8 47094807 to 47094816 9 + TSS region transcription start site region 77332
E330018M18Rik 8 47135651 to 47163704 28053 + lincRNA gene RIKEN cDNA E330018M18 gene
Tssr81219 8 47166085 to 47166087 2 - TSS region transcription start site region 81219
Stox2 8 47180048 to 47412459 232411 - protein coding gene storkhead box 2
Cpgi20324 8 47193113 to 47193565 452 CpG island CpG island 20324
Tssr81220 8 47220619 to 47220630 11 - TSS region transcription start site region 81220
Tssr77333 8 47220752 to 47220763 11 + TSS region transcription start site region 77333
Gm45537 8 47224459 to 47227166 2707 - unclassified gene predicted gene 45537
D8Mit126 8 47246020 to 47246166 146 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 126
Tssr2562 8 47249299 to 47249300 1 - TSS region transcription start site region 2562
Tssr81221 8 47254760 to 47254773 13 - TSS region transcription start site region 81221
Tssr81222 8 47267938 to 47267943 5 - TSS region transcription start site region 81222