Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:46523473-46753491

Filter by:
53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acsl1 8 46471037 to 46536051 65014 + protein coding gene acyl-CoA synthetase long-chain family member 1
Tssr77252 8 46526453 to 46526493 40 + TSS region transcription start site region 77252
Tssr77253 8 46527199 to 46527245 46 + TSS region transcription start site region 77253
Tssr77254 8 46528567 to 46528626 59 + TSS region transcription start site region 77254
Tssr77255 8 46530376 to 46530405 29 + TSS region transcription start site region 77255
Tssr77256 8 46530979 to 46530992 13 + TSS region transcription start site region 77256
Tssr77257 8 46534252 to 46534276 24 + TSS region transcription start site region 77257
Tssr81208 8 46534491 to 46534511 20 - TSS region transcription start site region 81208
Tssr77258 8 46534574 to 46534600 26 + TSS region transcription start site region 77258
Tssr77259 8 46534609 to 46534622 13 + TSS region transcription start site region 77259
Tssr77260 8 46534629 to 46534645 16 + TSS region transcription start site region 77260
Tssr77261 8 46534685 to 46534696 11 + TSS region transcription start site region 77261
Tssr77262 8 46534724 to 46534736 12 + TSS region transcription start site region 77262
Tssr77263 8 46534740 to 46534751 11 + TSS region transcription start site region 77263
Tssr77264 8 46534814 to 46534831 17 + TSS region transcription start site region 77264
Tssr77265 8 46534964 to 46535002 38 + TSS region transcription start site region 77265
Tssr77266 8 46535162 to 46535173 11 + TSS region transcription start site region 77266
Tssr77267 8 46535202 to 46535222 20 + TSS region transcription start site region 77267
Tssr77268 8 46535643 to 46535656 13 + TSS region transcription start site region 77268
Tssr77269 8 46535677 to 46535689 12 + TSS region transcription start site region 77269
Tssr77270 8 46535729 to 46535750 21 + TSS region transcription start site region 77270
Cpgi20318 8 46551601 to 46552615 1014 CpG island CpG island 20318
Tssr81209 8 46551727 to 46551742 15 - TSS region transcription start site region 81209
Tssr77271 8 46552024 to 46552079 55 + TSS region transcription start site region 77271
Cenpu 8 46552028 to 46580007 27979 + protein coding gene centromere protein U
Primpol 8 46575594 to 46617212 41618 - protein coding gene primase and polymerase (DNA-directed)
Gm45607 8 46604749 to 46605963 1214 + antisense lncRNA gene predicted gene 45607
Cpgi20319 8 46616697 to 46618001 1304 CpG island CpG island 20319
Tssr81210 8 46617167 to 46617225 58 - TSS region transcription start site region 81210
Casp3 8 46617291 to 46639689 22398 + protein coding gene caspase 3
Tssr77272 8 46617383 to 46617385 2 + TSS region transcription start site region 77272
Tssr77273 8 46617389 to 46617417 28 + TSS region transcription start site region 77273
Tssr77274 8 46617426 to 46617446 20 + TSS region transcription start site region 77274
Tssr77275 8 46638473 to 46638491 18 + TSS region transcription start site region 77275
Gm31111 8 46668942 to 46678998 10056 - lncRNA gene predicted gene, 31111
Cpgi20320 8 46686889 to 46687217 328 CpG island CpG island 20320
Gm16675 8 46730970 to 46739515 8545 - bidirectional promoter lncRNA gene predicted gene, 16675
Tssr81211 8 46735551 to 46735560 9 - TSS region transcription start site region 81211
Cpgi20321 8 46739126 to 46739859 733 CpG island CpG island 20321
Tssr81212 8 46739453 to 46739514 61 - TSS region transcription start site region 81212
Irf2 8 46739745 to 46847458 107713 + protein coding gene interferon regulatory factor 2
Tssr77276 8 46739753 to 46739791 38 + TSS region transcription start site region 77276
Tssr77277 8 46739812 to 46739824 12 + TSS region transcription start site region 77277
Tssr77278 8 46739841 to 46739846 5 + TSS region transcription start site region 77278
Tssr77279 8 46739849 to 46739871 22 + TSS region transcription start site region 77279
Tssr77280 8 46739876 to 46739885 9 + TSS region transcription start site region 77280
Cpgi20322 8 46740200 to 46741708 1508 CpG island CpG island 20322
Tssr77281 8 46740241 to 46740273 32 + TSS region transcription start site region 77281
Tssr77282 8 46740289 to 46740308 19 + TSS region transcription start site region 77282
Tssr77283 8 46745436 to 46745465 29 + TSS region transcription start site region 77283
Tssr77284 8 46749457 to 46749461 4 + TSS region transcription start site region 77284
Tssr77285 8 46750376 to 46750398 22 + TSS region transcription start site region 77285
Tssr77286 8 46752643 to 46752664 21 + TSS region transcription start site region 77286