Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:46169677-46340678

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfap97 8 46151777 to 46195590 43813 + protein coding gene cilia and flagella associated protein 97
Tssr77193 8 46194193 to 46194205 12 + TSS region transcription start site region 77193
Slc25a4 8 46207339 to 46211009 3670 - protein coding gene solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
Tssr77194 8 46207544 to 46207599 55 + TSS region transcription start site region 77194
Tssr81192 8 46207553 to 46207573 20 - TSS region transcription start site region 81192
Tssr81193 8 46207594 to 46207626 32 - TSS region transcription start site region 81193
Tssr81194 8 46208438 to 46208469 31 - TSS region transcription start site region 81194
Cpgi20312 8 46208442 to 46208618 176 CpG island CpG island 20312
Tssr81195 8 46208517 to 46208543 26 - TSS region transcription start site region 81195
Tssr81196 8 46209056 to 46209122 66 - TSS region transcription start site region 81196
Tssr81197 8 46209138 to 46209157 19 - TSS region transcription start site region 81197
Tssr81198 8 46209239 to 46209258 19 - TSS region transcription start site region 81198
Cpgi20313 8 46210268 to 46211498 1230 CpG island CpG island 20313
Tssr81199 8 46210393 to 46210404 11 - TSS region transcription start site region 81199
Tssr81200 8 46211020 to 46211036 16 - TSS region transcription start site region 81200
Actg-ps1 8 46229011 to 46230128 1117 + pseudogene actin, gamma, pseudogene 1
Gm23812 8 46229794 to 46229877 83 + miRNA gene predicted gene, 23812
Cpgi20314 8 46252332 to 46252527 195 CpG island CpG island 20314
Gm10313 8 46254677 to 46255678 1001 - pseudogene predicted pseudogene 10313
Gm24669 8 46272051 to 46272147 96 + snRNA gene predicted gene, 24669
Gm8575 8 46279672 to 46280192 520 + pseudogene predicted gene 8575
Gm30880 8 46281945 to 46284669 2724 - lncRNA gene predicted gene, 30880
Helt 8 46292043 to 46294671 2628 - protein coding gene helt bHLH transcription factor
Cpgi20315 8 46292098 to 46292742 644 CpG island CpG island 20315
Cpgi20316 8 46293936 to 46294901 965 CpG island CpG island 20316
Tssr81201 8 46294592 to 46294601 9 - TSS region transcription start site region 81201
Gm39168 8 46301637 to 46325729 24092 + lincRNA gene predicted gene, 39168
Tssr77195 8 46310739 to 46310743 4 + TSS region transcription start site region 77195
Gm45255 8 46313801 to 46314611 810 + unclassified gene predicted gene 45255