Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:45664228-45897316

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sorbs2 8 45507788 to 45827906 320118 + protein coding gene sorbin and SH3 domain containing 2
Gm30635 8 45649946 to 45665137 15191 - lncRNA gene predicted gene, 30635
D8Mit176 8 45666696 to 45666833 137 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 176
Tssr77154 8 45689982 to 45690000 18 + TSS region transcription start site region 77154
Tssr77155 8 45690101 to 45690112 11 + TSS region transcription start site region 77155
Tssr77156 8 45690121 to 45690144 23 + TSS region transcription start site region 77156
Tssr77157 8 45695379 to 45695394 15 + TSS region transcription start site region 77157
Tssr77158 8 45695469 to 45695483 14 + TSS region transcription start site region 77158
Tssr77159 8 45696414 to 45696418 4 + TSS region transcription start site region 77159
Sorbs2os 8 45723325 to 45819297 95972 - antisense lncRNA gene sorbin and SH3 domain containing 2, opposite strand
Tssr77160 8 45746617 to 45746628 11 + TSS region transcription start site region 77160
Tssr77161 8 45746670 to 45746685 15 + TSS region transcription start site region 77161
Tssr77162 8 45748954 to 45748959 5 + TSS region transcription start site region 77162
Tssr2560 8 45749002 to 45749010 8 + TSS region transcription start site region 2560
Tssr77163 8 45749285 to 45749299 14 + TSS region transcription start site region 77163
Tssr77164 8 45763873 to 45763933 60 + TSS region transcription start site region 77164
Tssr77165 8 45763938 to 45763951 13 + TSS region transcription start site region 77165
Tssr77166 8 45763957 to 45763970 13 + TSS region transcription start site region 77166
Gm45457 8 45779228 to 45782316 3088 + unclassified gene predicted gene 45457
Tssr77167 8 45784753 to 45784757 4 + TSS region transcription start site region 77167
Tssr77168 8 45791510 to 45791513 3 + TSS region transcription start site region 77168
Cpgi20304 8 45795725 to 45796054 329 CpG island CpG island 20304
Tssr77169 8 45803700 to 45803703 3 + TSS region transcription start site region 77169
Tssr77170 8 45827260 to 45827283 23 + TSS region transcription start site region 77170
Tssr77171 8 45827342 to 45827347 5 + TSS region transcription start site region 77171
Gm25309 8 45864478 to 45864603 125 - snRNA gene predicted gene, 25309
Cpgi20305 8 45885340 to 45885653 313 CpG island CpG island 20305
Tssr77172 8 45885364 to 45885387 23 + TSS region transcription start site region 77172
Pdlim3 8 45885461 to 45919548 34087 + protein coding gene PDZ and LIM domain 3
Tssr77173 8 45885479 to 45885494 15 + TSS region transcription start site region 77173
Tssr77174 8 45885529 to 45885540 11 + TSS region transcription start site region 77174
D8Mit175 8 45885965 to 45886092 127 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 175