Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:45362768-45652807

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam149a 8 45336717 to 45382291 45574 - protein coding gene family with sequence similarity 149, member A
Cpgi20301 8 45363678 to 45363938 260 CpG island CpG island 20301
Cpgi20302 8 45381207 to 45381809 602 CpG island CpG island 20302
Tssr81172 8 45382086 to 45382095 9 - TSS region transcription start site region 81172
Tssr81173 8 45382108 to 45382130 22 - TSS region transcription start site region 81173
Tssr81174 8 45382131 to 45382142 11 - TSS region transcription start site region 81174
Tssr81175 8 45382147 to 45382192 45 - TSS region transcription start site region 81175
Tssr81176 8 45382198 to 45382214 16 - TSS region transcription start site region 81176
Tlr3 8 45395665 to 45411080 15415 - protein coding gene toll-like receptor 3
Tssr81177 8 45409895 to 45409900 5 - TSS region transcription start site region 81177
Tssr2558 8 45409926 to 45409935 9 - TSS region transcription start site region 2558
Tssr2559 8 45409938 to 45409950 12 - TSS region transcription start site region 2559
Gm45542 8 45410063 to 45410760 697 + antisense lncRNA gene predicted gene 45542
Tssr81178 8 45410330 to 45410359 29 - TSS region transcription start site region 81178
Tssr81179 8 45410364 to 45410387 23 - TSS region transcription start site region 81179
Tssr81180 8 45410525 to 45410606 81 - TSS region transcription start site region 81180
Tssr81181 8 45410985 to 45411003 18 - TSS region transcription start site region 81181
D8Mit192 8 45459031 to 45459149 118 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 192
Tssr77128 8 45507502 to 45507522 20 + TSS region transcription start site region 77128
Tssr77129 8 45507737 to 45507740 3 + TSS region transcription start site region 77129
Tssr77130 8 45507768 to 45507807 39 + TSS region transcription start site region 77130
Sorbs2 8 45507788 to 45827906 320118 + protein coding gene sorbin and SH3 domain containing 2
Tssr77131 8 45507820 to 45507825 5 + TSS region transcription start site region 77131
Tssr77132 8 45507894 to 45507905 11 + TSS region transcription start site region 77132
Gm30759 8 45526389 to 45551328 24939 - lncRNA gene predicted gene, 30759
Gm45458 8 45539594 to 45540115 521 - unclassified gene predicted gene 45458
Tssr81182 8 45555732 to 45555735 3 - TSS region transcription start site region 81182
Tssr81183 8 45555737 to 45555745 8 - TSS region transcription start site region 81183
Gm16351 8 45579788 to 45599944 20156 - antisense lncRNA gene predicted gene 16351
Tssr77133 8 45579942 to 45579947 5 + TSS region transcription start site region 77133
Gm23604 8 45581616 to 45581747 131 - snoRNA gene predicted gene, 23604
Tssr77134 8 45627688 to 45627699 11 + TSS region transcription start site region 77134
Tssr77135 8 45627709 to 45627754 45 + TSS region transcription start site region 77135
Tssr77136 8 45627801 to 45627844 43 + TSS region transcription start site region 77136
Cpgi20303 8 45627824 to 45628160 336 CpG island CpG island 20303
Tssr77137 8 45627917 to 45627933 16 + TSS region transcription start site region 77137
Tssr77138 8 45627946 to 45627975 29 + TSS region transcription start site region 77138
Tssr77139 8 45627976 to 45628001 25 + TSS region transcription start site region 77139
Tssr77140 8 45628058 to 45628071 13 + TSS region transcription start site region 77140
Tssr77141 8 45628080 to 45628093 13 + TSS region transcription start site region 77141
Tssr77142 8 45628112 to 45628129 17 + TSS region transcription start site region 77142
Tssr77143 8 45628155 to 45628170 15 + TSS region transcription start site region 77143
Tssr77144 8 45628176 to 45628219 43 + TSS region transcription start site region 77144
Tssr81184 8 45630642 to 45630658 16 - TSS region transcription start site region 81184
Gm30635 8 45649946 to 45665137 15191 - lncRNA gene predicted gene, 30635