Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:44873758-45264320

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9908 8 44934712 to 44935159 447 - bidirectional promoter lncRNA gene predicted gene 9908
Cpgi20290 8 44934747 to 44936105 1358 CpG island CpG island 20290
Tssr81147 8 44935153 to 44935172 19 - TSS region transcription start site region 81147
Tssr77112 8 44935264 to 44935314 50 + TSS region transcription start site region 77112
Tssr77113 8 44935335 to 44935347 12 + TSS region transcription start site region 77113
Tssr77114 8 44935366 to 44935375 9 + TSS region transcription start site region 77114
Tssr77115 8 44935396 to 44935408 12 + TSS region transcription start site region 77115
Tssr2557 8 44935429 to 44935439 10 + TSS region transcription start site region 2557
Fat1 8 44935447 to 45052257 116810 + protein coding gene FAT atypical cadherin 1
Tssr77116 8 44935992 to 44936007 15 + TSS region transcription start site region 77116
Cpgi20291 8 44937007 to 44938793 1786 CpG island CpG island 20291
Tssr77117 8 44938137 to 44938214 77 + TSS region transcription start site region 77117
Tssr77118 8 44938238 to 44938249 11 + TSS region transcription start site region 77118
Tssr77119 8 44950655 to 44950669 14 + TSS region transcription start site region 77119
Tssr77120 8 44951347 to 44951384 37 + TSS region transcription start site region 77120
Tssr77121 8 44957034 to 44957038 4 + TSS region transcription start site region 77121
Tssr77122 8 44961441 to 44961445 4 + TSS region transcription start site region 77122
Tssr77123 8 45007225 to 45007254 29 + TSS region transcription start site region 77123
Cpgi20292 8 45010418 to 45010645 227 CpG island CpG island 20292
Gm2366 8 45017216 to 45022385 5169 - antisense lncRNA gene predicted gene 2366
Cpgi20293 8 45021941 to 45022206 265 CpG island CpG island 20293
Tssr81148 8 45024752 to 45024769 17 - TSS region transcription start site region 81148
Cpgi20294 8 45043955 to 45044617 662 CpG island CpG island 20294
Tssr77124 8 45050920 to 45050933 13 + TSS region transcription start site region 77124
Cpgi20295 8 45051063 to 45051640 577 CpG island CpG island 20295
Tssr77125 8 45051500 to 45051550 50 + TSS region transcription start site region 77125
Tssr77126 8 45051556 to 45051657 101 + TSS region transcription start site region 77126
AY512931 8 45060702 to 45065418 4716 - lincRNA gene cDNA sequence AY512931
Cpgi20296 8 45068758 to 45069320 562 CpG island CpG island 20296
Mtnr1a 8 45069137 to 45088506 19369 + protein coding gene melatonin receptor 1A
Cpgi20297 8 45087356 to 45087609 253 CpG island CpG island 20297
Gm30504 8 45110481 to 45196541 86060 + lincRNA gene predicted gene, 30504
D8Mit229 8 45140338 to 45140499 161 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 229
Gm6329 8 45160494 to 45165145 4651 - lincRNA gene predicted gene 6329
Tssr77127 8 45186722 to 45186731 9 + TSS region transcription start site region 77127
F11 8 45241174 to 45262031 20857 - protein coding gene coagulation factor XI
Cpgi20298 8 45252049 to 45252370 321 CpG island CpG island 20298
Tssr81149 8 45261976 to 45261996 20 - TSS region transcription start site region 81149
Tssr81150 8 45262002 to 45262009 7 - TSS region transcription start site region 81150
Tssr81151 8 45262012 to 45262057 45 - TSS region transcription start site region 81151
Tssr81152 8 45262075 to 45262084 9 - TSS region transcription start site region 81152
Tssr81153 8 45262108 to 45262119 11 - TSS region transcription start site region 81153